Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ftr4g03771 | ATGAAGCAGATGCAATCTTCTGTAGGTTTCATCGATTTCAAGCCCATGGCGTCTTCTTCATCTTCTTGGTGGCAGTCACTCTTCTCTCCGAACAAAAATTCGTTCACTGCACACTGTTTCAATCGCTTCAGAGAATACGGGGTGGCGTGGGATGTATTGGATATGTTTGTTTGCTTATATGTTAAGGAGTGGCTTTGTGCCATTAAAGCCAAATTTACATCACCAGAAGAGAATAAAGCATTAGCAAGTCTTAAGGAAATGGAGAAGATTATAGGGTATAAATTCAAGAAGAAGTTATTATTGCAACAAGCTCTTACACACCCAAGTTATCAAGGATCTGAAACCTATGAAAGACTTGAGTATGTTGGTGATTCAATTCTCAATTTTTTAATTAGTAAGCATCAATACTTTATGTACCCAAATCTCTCACCAGGGTCATTAACTGCTCTTCGAGCTGCTAATGTAGACACTGAGAAATTAGCACGTGTGGCTGTTAAATATAACTTCCATAGCTATCTTCGACATGAAAATCCCACGCTTAGTAAGCAAATTCGAGTATTTATTAAAGCCCTTGAAAAGTATCCATTTCATTCATATGGATTAATTGATGCTCCAAAGACTTTAGCTGATATCGTTGAATCCACAATTGGGGCTATCTACATTGACAGTAACTCTTCTATCGATACCACATGGGAGGTGGTTAAGGTTTTACTTGAGCCCATGATCACTCCTGAAATGCTTCAACAGAATCCAGTAAGGAAGCTGAATGAACTCTGCCACAAAAGGAAATTAAAGATAAGATTCAGAGACAAATGGTCAAAGGAAGGTGTTTATGAAGTTTTTATTGATAATCAACTCAAAGGAAAAGGTGAATACAAAGCCAAAAAGGAAATTGCACTCAATAGAGCAGCTGAGGATGCATGTAACACTATTTTGAACAATATCACTGCTAAAAACAATACATCTCAATAG | 972 | 37.24 | MKQMQSSVGFIDFKPMASSSSSWWQSLFSPNKNSFTAHCFNRFREYGVAWDVLDMFVCLYVKEWLCAIKAKFTSPEENKALASLKEMEKIIGYKFKKKLLLQQALTHPSYQGSETYERLEYVGDSILNFLISKHQYFMYPNLSPGSLTALRAANVDTEKLARVAVKYNFHSYLRHENPTLSKQIRVFIKALEKYPFHSYGLIDAPKTLADIVESTIGAIYIDSNSSIDTTWEVVKVLLEPMITPEMLQQNPVRKLNELCHKRKLKIRFRDKWSKEGVYEVFIDNQLKGKGEYKAKKEIALNRAAEDACNTILNNITAKNNTSQ | 323 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ftr4g03771 | 323 | Pfam | Ribonuclease III domain | 117 | 223 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Ftr4g03771 | 323 | SUPERFAMILY | dsRNA-binding domain-like | 206 | 311 | - | - | |
| Ftr4g03771 | 323 | ProSiteProfiles | Ribonuclease III family domain profile. | 84 | 224 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Ftr4g03771 | 323 | SMART | riboneu5 | 99 | 247 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Ftr4g03771 | 323 | CDD | RIBOc | 100 | 247 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Ftr4g03771 | 323 | PANTHER | DICER-RELATED | 63 | 314 | - | GO:0003723(PANTHER)|GO:0004525(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0030422(PANTHER) | |
| Ftr4g03771 | 323 | Gene3D | Ribonuclease III domain | 73 | 246 | IPR036389 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Ftr4g03771 | 323 | ProSitePatterns | Ribonuclease III family signature. | 117 | 125 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Ftr4g03771 | 323 | SUPERFAMILY | RNase III domain-like | 83 | 244 | IPR036389 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Ftr4g03771 | 323 | FunFam | Endoribonuclease dicer-like 1 | 78 | 245 | - | - | |
| Ftr4g03771 | 323 | Gene3D | - | 247 | 322 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ftr4g03771 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ftr | Ftr-Chr16:60401245 | Ftr4g03771 | Ftr-Chr4:121590858 | dispersed |