AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr4g03784 ATGATCTACCTCTTTTTCGCCGTTTTACTCGTCGAAATGGTGACGATTCTGCTGCTGTTGTTCAAAACCCCACTCCGGAAGCTTCTGATCATCGGATTAGATCGTGCGAAACGAGGAAGAGCTCCGTTGGTTGTCAAATCCGTCGGCGCCACCGTGTTCGTCATCATGATGTATAACGTTTATAGTGTAACGGAGATCCAGAGCCGTCCGGCCGACGTTATTAATCCTACAGATCAAGTTATTCTCGCTTATCACATGCTTGAAGCTTCTCTTATGGGATTCTCCCTTTTCCTATCACTAATGATAGATAGACTACATCACTACATAAGAGAACTTCGAATACTTAGAAAAACAATGGAAGCTGCAAAGAAACAAAACAGAGCAGCTGAAGAAACCAAGAACAAAGGTGCAGATGAGGCTAAAATCCTAAATGATGAAATATCCAAACTAAAATCACATATTAAGAAACTCGAATCTGAACATGAGACAAAGGAAAAGGAGATCAAATCTGCAGAAGCTAATTCGGTTGCTCTCAAGAACCAATCAGAAGGCTTTCTTCTCGAATATGATCGTTTGTTAGCAGAAAACCAAAATCTTCGAGATCAATTGCGGGCCATTGATGACAACATGTCTCATTCGACTGGAAAGAAGAATATGTGA 660 41.06 MIYLFFAVLLVEMVTILLLLFKTPLRKLLIIGLDRAKRGRAPLVVKSVGATVFVIMMYNVYSVTEIQSRPADVINPTDQVILAYHMLEASLMGFSLFLSLMIDRLHHYIRELRILRKTMEAAKKQNRAAEETKNKGADEAKILNDEISKLKSHIKKLESEHETKEKEIKSAEANSVALKNQSEGFLLEYDRLLAENQNLRDQLRAIDDNMSHSTGKKNM 219
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr4g03784 219 Coils Coil 105 181 - -
Ftr4g03784 219 Gene3D - 136 199 - -
Ftr4g03784 219 FunFam B-cell receptor-associated protein 29 136 199 - -
Ftr4g03784 219 Coils Coil 189 209 - -
Ftr4g03784 219 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 200 IPR008417 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr4g03784 K14009 B-cell receptor-associated protein 31
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
98141 Ftr4g03784 Ftr9g01848
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr14:10455382 Ftr4g03784 Ftr-Chr4:121737737 dispersed
Ftr Ftr-Chr4:9896827 Ftr4g03784 Ftr-Chr4:121737737 dispersed
Ftr Ftr-Chr4:121737737 Ftr8g00781 Ftr-Chr8:9046684 dispersed
Ftr Ftr-Chr4:121737737 Ftr9g01848 Ftr-Chr9:78159287 wgd