AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr4g03804 ATGGCTTCTTCTTCTAGTTGCAGCTTCATCTTCTTTGCTCTATTGCTTATTATACAATTTTGCAGTGCTCGTGAAATCGTGGACAAAAACCAAAACAACAATCACAATGAAGAATATGATATAAATTTATACGGAAATAATGGTGTTTATGATTTGGATCCGGCTCTAAATGTGTTCTTTCATGTACACGATTTATATTTGGGCAAAAAAATGCCAATTTATTTCGCGGTTAATGATCCTTCAACAACTCCTCGATTGTTAACACGAAAACAATCCGACTCCATACCATTTTCCTCCAAAAAGCTCACGTATATTCTAGAACTTACATCATTACCTGAGGGTTCACCGCAAGCTCTAGCCATGGAGCAAACACTCAAACAATGTGAGCTCGAGGCAACCCCTGGTGAAACGAGGTTTTGTGCTAGCTCGTTAGAGTCCGTGCTGGACTCTACACGCGAGATATTAGGTTCGGTCAAACTAAAAGCGTTGACCACCGATATCCGCAATTTGTCAAATACCCTTTTGCAAGAGTACACCTTTTTGAAGGAGCCAATGGAGATTAATGTTTCTGATATGGTGGCATGTCACACCATGGCTTATCCTTATGCTGTTTTTTATTGTCATGGTCAAAAGGGGTATAATAGGGTTTTTGAGATTTCTCTAGGGGGTGAAAATGGAAATATATTGGATGCTATTGCTGTTTGCCACATGGACACTTCGATGTGGGATAGTGACCACGTGGCGTTTCGTGTGCTCGGAGGCCACCCTGGCAGCTCGCCAGTGTGTCATTTTCTCCCAGCCGATAACATTGTGTGGATACCGTCACCATAG 831 41.88 MASSSSCSFIFFALLLIIQFCSAREIVDKNQNNNHNEEYDINLYGNNGVYDLDPALNVFFHVHDLYLGKKMPIYFAVNDPSTTPRLLTRKQSDSIPFSSKKLTYILELTSLPEGSPQALAMEQTLKQCELEATPGETRFCASSLESVLDSTREILGSVKLKALTTDIRNLSNTLLQEYTFLKEPMEINVSDMVACHTMAYPYAVFYCHGQKGYNRVFEISLGGENGNILDAIAVCHMDTSMWDSDHVAFRVLGGHPGSSPVCHFLPADNIVWIPSP 276
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr4g03804 276 ProSiteProfiles BURP domain profile. 59 275 IPR004873 -
Ftr4g03804 276 Pfam BURP domain 58 273 IPR004873 -
Ftr4g03804 276 SMART BURP-2 57 275 IPR004873 -
Ftr4g03804 276 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 37 275 IPR044816 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr4g03804 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr4:121923119 Ftr8g01044 Ftr-Chr8:13569276 dispersed
Ftr Ftr-Chr4:121923119 Ftr4g03805 Ftr-Chr4:121945896 tandem