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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr4g03860 ATGGCTTCAAGTTTTCCCTCAAAATACATATCAACCTCTCAAGAATATCCTTTTCATTTTCATGGAAAGTTTCGAATACACAAAGATGGTCGATGTGAAAGATTCATCGGAACCGATATCGTCCCCGCCGGAACCGATCCCACCACCGGCGTCCAATCAAAAGACGTCATCGTCTCACACGAAACGAATGTCTTTGTAAGGATTTACATCCCTAAAACCATCACCGGCAAACACAAACTCCCTACTCTGATTTACTATCACGGTGGCGCTTTATTGACAGAATCCGCCGCTTCTCCAACCTACCACCCAACACTTAACTTGATCACATCAGAATCCAACGTGGTTATCGTGTCAGTAAACTACAGGCTAGCGCCCGAGCATCTTATACCTACAGCGTACGAGGATTCTTGGGACGCGATCCAGTGGGTCGCGTCTCATGCGACCAAAAATGGTTGCGAGCCATGGTTAAATGACCATGCAGACCTTCATAATGTGTTTTTCATTGGAGATAGTGCGGGCGCCAATATTGCCCACAACATGGCTATACGGGCCGGGTTGAGCCCAATTAAGGGTATTAACCTTAACGGGCTTATTTTACTCCACCCGTTTTTTTTAGGAAAAATCCAAAATGGACCCGTTTGTGATGAGTGGGTAGTGTTGATGGAGATGACATGGAAGTTGGTGAACCGACCTGGGATCGGGCTGGATGACCCGTTGATTGATCCGAGCGTGGACCCGCGTGTTTCGGGATTGGGATGTAAAAGGATACTTGTTTGTGTTGGTGAGAAGGATAAGTTGAAGCCTTGGGGTGTTAACTACAAAAATGTGATGGAGAAAAGCGGATGGAAAGGACAAGTGGAGTTGATGGAGAGTGTAGGGGAGGGGCATGTGTTCTTTTTGTCTAATACATCTAGTGAAAATGCTTGTACGTTACGCAACAGGATTTGTACTTTTATTAACCCGATTCGTAGTAGATCTTGA 981 45.67 MASSFPSKYISTSQEYPFHFHGKFRIHKDGRCERFIGTDIVPAGTDPTTGVQSKDVIVSHETNVFVRIYIPKTITGKHKLPTLIYYHGGALLTESAASPTYHPTLNLITSESNVVIVSVNYRLAPEHLIPTAYEDSWDAIQWVASHATKNGCEPWLNDHADLHNVFFIGDSAGANIAHNMAIRAGLSPIKGINLNGLILLHPFFLGKIQNGPVCDEWVVLMEMTWKLVNRPGIGLDDPLIDPSVDPRVSGLGCKRILVCVGEKDKLKPWGVNYKNVMEKSGWKGQVELMESVGEGHVFFLSNTSSENACTLRNRICTFINPIRSRS 326
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr4g03860 326 SUPERFAMILY alpha-beta-Hydrolases 8 320 IPR029058 -
Ftr4g03860 326 Pfam alpha-beta hydrolase fold 83 299 IPR013094 GO:0016787(InterPro)
Ftr4g03860 326 PANTHER ARYLACETAMIDE DEACETYLASE 24 310 IPR050466 -
Ftr4g03860 326 Gene3D alpha-beta hydrolase 10 320 IPR029058 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr4g03860 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
98148 Ftr4g03860 Ftr8g01092
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr4:122576516 Ftr8g01092 Ftr-Chr8:14172399 dispersed
Ftr Ftr-Chr4:122576516 Ftr4g03863 Ftr-Chr4:122592327 proximal
Ftr Ftr-Chr5:9522300 Ftr4g03860 Ftr-Chr4:122576516 transposed
Ftr Ftr-Chr15:2763650 Ftr4g03860 Ftr-Chr4:122576516 wgd
Ftr Ftr-Chr4:122576516 Ftr9g01691 Ftr-Chr9:75605860 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Ftr1g00099 ACH 7 128 Carbohydrate Esterase gene family AT4G15980 28.682 3.36e-07 47.0
Ftr1g00100 . 219 606 Carbohydrate Esterase gene family AT4G33230 42.29 7.36e-103 316.0
Ftr1g00143 WGDA 1 343 Carbohydrate Esterase gene family AT3G63010 72.414 0.0 525.0
Ftr1g01996 ACH 51 218 Carbohydrate Esterase gene family AT1G53830 32.544 1.57e-21 89.7
Ftr1g01997 ACH 51 216 Carbohydrate Esterase gene family AT1G53830 30.539 8.61e-21 87.4
Ftr1g01998 ACH 51 216 Carbohydrate Esterase gene family AT1G53830 32.934 3.14e-21 89.0
Ftr1g02000 . 37 536 Carbohydrate Esterase gene family AT5G51490 52.079 0.0 519.0
Ftr1g02018 . 1 359 Carbohydrate Esterase gene family AT5G61570 50.139 4.71e-112 328.0
Ftr1g02480 ACH,WGDA 59 219 Carbohydrate Esterase gene family AT3G14310 28.235 3.80e-15 72.0
Ftr2g00755 . 5 104 Carbohydrate Esterase gene family AT1G02810 34.314 4.38e-16 70.9
Ftr2g03267 . 91 388 Carbohydrate Esterase gene family AT1G05310 56.711 1.59e-123 362.0
Ftr3g01755 . 215 342 Carbohydrate Esterase gene family AT5G16080 33.083 2.30e-18 77.4
Ftr3g02055 . 37 330 Carbohydrate Esterase gene family AT5G47500 75.85 1.06e-170 476.0
Ftr3g02149 . 8 214 Carbohydrate Esterase gene family AT3G05610 33.962 3.11e-33 129.0
Ftr3g02150 . 252 566 Carbohydrate Esterase gene family AT3G05610 56.825 2.02e-137 402.0
Ftr3g02722 . 69 389 Carbohydrate Esterase gene family AT1G05310 71.651 0.0 506.0
Ftr3g02895 . 23 194 Carbohydrate Esterase gene family AT1G68620 36.413 2.68e-35 124.0
Ftr4g00164 . 325 511 Carbohydrate Esterase gene family AT2G45220 60.317 1.40e-76 236.0
Ftr4g00165 ACH 11 279 Carbohydrate Esterase gene family AT2G45220 55.516 4.90e-104 311.0
Ftr4g00167 ACH 7 210 Carbohydrate Esterase gene family AT3G05620 25.0 2.66e-10 57.4
Ftr4g00190 . 12 92 Carbohydrate Esterase gene family AT1G49660 36.782 2.66e-09 51.6
Ftr4g00591 ACH 1 588 Carbohydrate Esterase gene family AT2G47030 38.288 2.09e-132 398.0
Ftr4g00633 . 184 518 Carbohydrate Esterase gene family AT4G02320 62.5 2.40e-161 460.0
Ftr4g00634 . 66 185 Carbohydrate Esterase gene family AT1G53830 40.164 1.36e-17 78.2
Ftr4g00893 . 50 216 Carbohydrate Esterase gene family AT3G14310 30.539 2.14e-16 74.3
Ftr4g00897 . 1 612 Carbohydrate Esterase gene family AT2G26450 44.944 0.0 540.0
Ftr4g00953 . 6 284 Carbohydrate Esterase gene family AT2G41530 80.0 4.95e-176 485.0
Ftr4g02953 . 4 416 Carbohydrate Esterase gene family AT5G26670 66.828 0.0 592.0
Ftr4g03063 . 12 627 Carbohydrate Esterase gene family AT3G05610 44.717 0.0 580.0
Ftr4g03860 ACH 4 314 Carbohydrate Esterase gene family AT1G19190 44.551 3.08e-87 263.0
Ftr4g03863 . 4 330 Carbohydrate Esterase gene family AT3G48700 42.508 6.29e-90 271.0
Ftr5g00425 . 4 306 Carbohydrate Esterase gene family AT3G48700 45.574 4.42e-90 271.0
Ftr5g02596 WGDA 1 343 Carbohydrate Esterase gene family AT3G63010 73.563 0.0 536.0
Ftr5g02630 . 58 211 Carbohydrate Esterase gene family AT3G05610 28.125 2.21e-15 71.6
Ftr5g02634 . 455 558 Carbohydrate Esterase gene family AT2G47550 64.423 2.70e-45 151.0
Ftr5g02635 . 8 366 Carbohydrate Esterase gene family AT4G02330 46.389 4.45e-101 307.0
Ftr6g00125 ACH 75 229 Carbohydrate Esterase gene family AT5G53370 29.412 3.08e-16 75.5
Ftr6g01953 . 13 432 Carbohydrate Esterase gene family AT3G09410 61.905 0.0 553.0
Ftr6g02326 . 1 341 Carbohydrate Esterase gene family AT3G63010 73.333 0.0 538.0
Ftr6g02539 . 29 118 Carbohydrate Esterase gene family AT3G16970 27.083 8.69e-07 43.9
Ftr6g02733 . 207 729 Carbohydrate Esterase gene family AT5G36210 73.231 0.0 823.0
Ftr6g02734 . 68 179 Carbohydrate Esterase gene family AT5G36210 68.103 2.26e-43 151.0
Ftr7g00703 . 5 561 Carbohydrate Esterase gene family AT3G10710 53.982 0.0 620.0
Ftr7g01895 ACH 41 422 Carbohydrate Esterase gene family AT3G02410 72.513 0.0 592.0
Ftr7g02160 ACH 52 213 Carbohydrate Esterase gene family AT3G14310 27.439 2.93e-16 74.7
Ftr7g02418 . 6 566 Carbohydrate Esterase gene family AT5G49180 45.664 0.0 524.0
Ftr7g02464 WGDA 7 375 Carbohydrate Esterase gene family AT4G19420 53.743 1.17e-147 422.0
Ftr7g02514 . 41 327 Carbohydrate Esterase gene family AT5G16080 34.459 4.79e-48 162.0
Ftr7g02623 . 305 446 Carbohydrate Esterase gene family AT5G14310 73.944 1.31e-74 227.0
Ftr7g02624 . 1 286 Carbohydrate Esterase gene family AT5G14310 50.871 8.54e-89 268.0
Ftr8g00043 ACH 56 220 Carbohydrate Esterase gene family AT1G53830 28.655 2.25e-14 69.3
Ftr8g00044 ACH 9 140 Carbohydrate Esterase gene family AT2G45220 46.212 2.47e-41 142.0
Ftr8g00275 WGDA 66 218 Carbohydrate Esterase gene family AT1G53830 31.613 1.61e-18 80.5
Ftr8g00276 ACH 53 213 Carbohydrate Esterase gene family AT3G14310 26.38 5.97e-17 76.6
Ftr8g00515 . 9 389 Carbohydrate Esterase gene family AT4G19420 60.63 0.0 520.0
Ftr8g00516 WGDA 3 389 Carbohydrate Esterase gene family AT4G19420 63.239 0.0 559.0
Ftr8g00580 . 15 375 Carbohydrate Esterase gene family AT4G19420 54.121 5.21e-149 425.0
Ftr8g00581 . 9 80 Carbohydrate Esterase gene family AT4G19420 50.685 1.56e-23 90.1
Ftr8g00582 . 93 374 Carbohydrate Esterase gene family AT4G19410 51.064 4.95e-114 332.0
Ftr8g01092 ACH 4 325 Carbohydrate Esterase gene family AT3G48700 40.867 3.78e-79 243.0
Ftr9g00659 . 4 525 Carbohydrate Esterase gene family AT4G33220 55.142 0.0 628.0
Ftr9g01691 . 10 305 Carbohydrate Esterase gene family AT3G48700 47.297 1.01e-80 246.0
Ftr9g01823 . 27 118 Carbohydrate Esterase gene family AT3G16970 32.979 1.61e-10 53.9
Ftr9g02067 . 218 582 Carbohydrate Esterase gene family AT1G53840 65.489 0.0 515.0
Ftr9g02068 . 1 187 Carbohydrate Esterase gene family AT1G53840 48.663 3.36e-49 166.0
Ftr9g02069 . 54 592 Carbohydrate Esterase gene family AT3G14310 63.339 0.0 721.0
Ftr9g02390 . 61 357 Carbohydrate Esterase gene family AT5G47500 50.336 3.01e-105 312.0
Ftr10g00021 . 326 587 Carbohydrate Esterase gene family AT5G53370 80.989 1.63e-164 466.0
Ftr10g00096 . 115 511 Carbohydrate Esterase gene family AT2G45220 43.099 1.00e-109 330.0
Ftr10g00097 . 150 198 Carbohydrate Esterase gene family AT3G05620 36.735 7.61e-06 38.5
Ftr10g00098 ACH,WGDA 55 222 Carbohydrate Esterase gene family AT1G53830 28.571 3.84e-17 77.0
Ftr10g00112 . 1 359 Carbohydrate Esterase gene family AT5G61570 48.396 1.56e-111 328.0
Ftr10g00836 ACH 41 422 Carbohydrate Esterase gene family AT3G02410 71.244 0.0 560.0
Ftr10g00955 ACH,WGDA 1 342 Carbohydrate Esterase gene family AT5G16080 50.862 9.58e-115 335.0
Ftr10g01267 . 1 341 Carbohydrate Esterase gene family AT3G05120 74.656 0.0 551.0
Ftr10g01300 . 45 546 Carbohydrate Esterase gene family AT5G09760 65.936 0.0 684.0
Ftr11g00178 . 72 231 Carbohydrate Esterase gene family AT5G53370 33.136 2.82e-20 86.7
Ftr11g00400 . 23 329 Carbohydrate Esterase gene family AT1G68620 36.503 2.61e-64 205.0
Ftr11g00626 . 5 137 Carbohydrate Esterase gene family AT3G16970 27.007 1.94e-09 51.2
Ftr12g00199 . 29 324 Carbohydrate Esterase gene family AT5G16080 33.663 7.18e-52 172.0
Ftr12g03067 . 59 362 Carbohydrate Esterase gene family AT5G47500 39.048 2.24e-71 224.0
Ftr12g04148 . 205 592 Carbohydrate Esterase gene family AT3G14310 73.077 0.0 568.0
Ftr12g04149 . 16 147 Carbohydrate Esterase gene family AT3G14310 47.552 1.56e-29 112.0
Ftr13g00317 . 1 118 Carbohydrate Esterase gene family AT3G16970 24.286 2.70e-07 45.8
Ftr13g00429 . 514 592 Carbohydrate Esterase gene family AT3G14310 65.823 6.77e-30 112.0
Ftr13g00430 . 52 329 Carbohydrate Esterase gene family AT1G53830 46.763 1.13e-80 254.0
Ftr13g00663 . 53 359 Carbohydrate Esterase gene family AT5G07430 39.739 5.37e-85 258.0
Ftr13g01538 . 1 292 Carbohydrate Esterase gene family AT3G49220 46.128 1.21e-71 230.0
Ftr13g01733 . 6 361 Carbohydrate Esterase gene family AT1G69940 49.304 3.84e-131 379.0
Ftr13g02279 ACH,WGDA 59 219 Carbohydrate Esterase gene family AT3G14310 27.607 9.65e-17 75.9
Ftr14g00068 . 35 286 Carbohydrate Esterase gene family AT1G68620 33.962 7.40e-42 146.0
Ftr14g00079 . 2 511 Carbohydrate Esterase gene family AT2G45220 59.768 0.0 640.0
Ftr14g00080 . 2 511 Carbohydrate Esterase gene family AT2G45220 64.231 0.0 678.0
Ftr14g00311 WGDA 51 218 Carbohydrate Esterase gene family AT1G53830 30.588 9.02e-20 84.0
Ftr14g00447 WGDA 9 389 Carbohydrate Esterase gene family AT4G19420 62.467 0.0 533.0
Ftr15g00081 . 237 325 Carbohydrate Esterase gene family AT3G48700 47.191 1.11e-16 71.6
Ftr15g00883 . 36 543 Carbohydrate Esterase gene family AT3G05620 66.214 0.0 709.0
Ftr15g01640 . 252 348 Carbohydrate Esterase gene family AT3G63010 33.333 2.56e-13 62.0
Ftr15g02125 WGDA 3 374 Carbohydrate Esterase gene family AT4G19410 50.789 1.31e-145 417.0
Ftr15g02128 . 456 549 Carbohydrate Esterase gene family AT1G23200 56.383 5.91e-35 123.0
Ftr15g02129 . 248 357 Carbohydrate Esterase gene family AT1G23200 54.545 5.17e-36 135.0
Ftr15g02439 . 2 418 Carbohydrate Esterase gene family AT2G45220 66.353 0.0 577.0
Ftr15g02441 ACH 41 225 Carbohydrate Esterase gene family AT5G53370 26.768 2.55e-12 63.5
Ftr15g02442 . 46 224 Carbohydrate Esterase gene family AT5G53370 26.289 2.47e-10 57.4
Ftr15g02443 . 39 224 Carbohydrate Esterase gene family AT5G53370 25.373 1.76e-10 57.8
Ftr15g02444 . 42 224 Carbohydrate Esterase gene family AT5G53370 26.768 2.46e-11 60.5
Ftr15g02445 . 79 224 Carbohydrate Esterase gene family AT5G53370 29.878 1.66e-10 57.8
Ftr15g02446 . 75 224 Carbohydrate Esterase gene family AT5G53370 29.375 2.71e-12 63.2
Ftr16g01756 . 35 540 Carbohydrate Esterase gene family AT5G51500 53.15 0.0 551.0
Ftr17g00480 . 169 247 Carbohydrate Esterase gene family AT1G53840 34.177 5.74e-10 52.0
Ftr17g00481 . 8 109 Carbohydrate Esterase gene family AT5G04960 24.074 7.51e-06 42.4
Ftr17g01941 . 39 332 Carbohydrate Esterase gene family AT2G19150 44.932 7.56e-88 266.0
Ftr18g01250 WGDA 1 342 Carbohydrate Esterase gene family AT5G16080 51.437 4.01e-113 330.0
Ftr18g02054 . 10 581 Carbohydrate Esterase gene family AT1G53840 51.82 0.0 602.0
Ftr18g02071 . 1 359 Carbohydrate Esterase gene family AT5G61570 49.865 1.29e-116 341.0
Ftr18g02080 . 37 540 Carbohydrate Esterase gene family AT5G51500 54.348 0.0 571.0
Ftr18g02081 ACH,WGDA 51 222 Carbohydrate Esterase gene family AT1G53830 30.601 3.32e-18 80.1
Ftr18g02082 . 39 220 Carbohydrate Esterase gene family AT1G53830 26.374 1.71e-13 66.6
Ftr18g02083 ACH,WGDA 51 221 Carbohydrate Esterase gene family AT1G53830 28.736 3.00e-18 80.1
Ftr18g02085 . 2 511 Carbohydrate Esterase gene family AT2G45220 60.687 0.0 659.0
Ftr18g02115 . 35 404 Carbohydrate Esterase gene family AT5G23870 66.486 0.0 534.0
Ftr10001307.1g00002 . 32 155 Carbohydrate Esterase gene family AT5G09760 48.413 3.44e-30 112.0
Ftr10000785.1g00011 . 4 329 Carbohydrate Esterase gene family AT1G68620 52.802 1.93e-123 357.0
Ftr10000646.1g00005 . 254 340 Carbohydrate Esterase gene family AT2G45220 77.011 6.87e-40 137.0
Ftr10000646.1g00006 . 54 592 Carbohydrate Esterase gene family AT3G14310 52.459 0.0 555.0
Ftr10000646.1g00007 . 54 106 Carbohydrate Esterase gene family AT3G14310 43.636 1.78e-08 48.5
Ftr10000646.1g00008 . 363 592 Carbohydrate Esterase gene family AT3G14310 68.261 3.53e-115 339.0
Ftr10001284.1g00003 . 23 305 Carbohydrate Esterase gene family AT1G68620 32.45 1.37e-47 161.0
Ftr10001019.1g00002 . 4 416 Carbohydrate Esterase gene family AT5G26670 67.146 0.0 597.0