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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr4g03870 ATGGCGGAACCAAAACACTCACATCAGTTTCTCTCCAAACAACGCTCGTGGTCGCCGGACATCCACCGCGACATCGAGTGGCAGAAGCTGAAGAACAACCAGCAACGCCGCTACCGCCACCGCCGGAGCAAGAGCATCGACGGTGTTAAGGAGGTTGAAGTCACTGATGATGATGTGAAGGAGCTGAAAGCGTGCTTTGATTTAGGTTTCGGTTTCGGTGTTGATTTCTCTAGTGATTTGGATCCGAAGCTTTCGCAGGCTTTTCCGGCGCTTGAACTTTACGCGGCGGTTAATCGGCAGTATAATAGTAGGATTCTATCGAGATCTTCGTCGTTGAGTTCGGATTCGTCGTCGAGTTCGTCGTGTTCAACTACTGCTATCGTTGATCCAAGTGATGATCCGAAGAAGGTGAAGACGAAACTGAAGCAATGGGCGCAACTGGTTTCTTGTTCAGTTCTGGAAGCTTCTACTCAGCTAGCCAATAACAAAAAACCCGTAGAGTAG 504 49.21 MAEPKHSHQFLSKQRSWSPDIHRDIEWQKLKNNQQRRYRHRRSKSIDGVKEVEVTDDDVKELKACFDLGFGFGVDFSSDLDPKLSQAFPALELYAAVNRQYNSRILSRSSSLSSDSSSSSSCSTTAIVDPSDDPKKVKTKLKQWAQLVSCSVLEASTQLANNKKPVE 167
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr4g03870 167 MobiDBLite consensus disorder prediction 109 128 - -
Ftr4g03870 167 PANTHER OSJNBA0071G03.3 PROTEIN 9 153 - -
Ftr4g03870 167 Pfam Protein of unknown function (DUF1685) 54 115 IPR012881 -
Ftr4g03870 167 MobiDBLite consensus disorder prediction 109 135 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr4g03870 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
98149 Ftr4g03870 Ftr8g01213
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr12:96886373 Ftr4g03870 Ftr-Chr4:122670984 dispersed
Ftr Ftr-Chr4:122670984 Ftr7g01831 Ftr-Chr7:89525712 dispersed
Ftr Ftr-Chr4:122670984 Ftr8g01213 Ftr-Chr8:16456457 transposed