AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr6g02278 ATGTTATTCATCACATATAATTATCATCATACTTTGTTTGTAAAGAACTTGACGATTGATTCATTCATTCACCGACTCCACTGCCCCTTTTTGAAGATCAATAGTTATCAAACTATGGCTTCTGTTAATCACCTTCATCACTCTCCTCTCGCCGGAAACAACCGCCGTTTCAATCGTCATATCCACTTCTCCGGCCTCCGATCACCACCTCTCGCCGGAAAAACACTCGTCGATTTCACCGGTTTATCTCTCCGATCAAAGTCAATCAACCCTAATCTACTATCTAATCAACAACATATTACTCCCTGTGCTACCGGCGGCGGCGGTGGTACTGGCGTCCGCCACGGCGGAGGAAGCGGTGGTGACGGTGGTGATGGCCACCGGAGTGGTGGAAACTCCGATGACTCATCAATGTCATCATCTATCAACAGTTTTGGCCCAATTGGTGCTTTCCTTAACGGTTGGAGATCTAGGGTTTCTGCTGATCCCCAATTTCCATTCAAGGTGTTAATGGAGGAAGTTGTAGGTGTGAGTGCCACCGTGTTCGGTGACATGGCGACTCGCCCGAATTTCGGGCTAAACGAGCTCGATTTCGTGTTTTCGACACTCGTAGTAGGCTCAATCCTCAACTTCACCCTCATGTATCTGTTAGCACCCACTGTCACATCAGCATCAGCCACACTCCCTTGGATATTCACTAACTCACCCACGAGCCACATGTTCGAGCCGGGTGCGTACACCCTGGCTAACCGGCTAGGGACATTTGTGTACAAAGGGACCCTGTTTGCAGCTGTGGGGTTTGCAGCTGGTTTGGTTGGGACTGCATTGTCCAATGGGTTGATCATGGTTAGGAAGAGGATGGACCCTGGGTTCGAGTCACCTAACAACGCTCCGCCTACTGTTTTAAATGCGGTCACGTGGGCGGTTCATATGGGCTTGAGTGCTAATCTTAGGTACCAGAGTTTGAATGGGGTCGAGTTTGTGCTCGCGAAGGGGCTGCCCCCGTTGTTGTTTAAGGGCGCGGTGTTCGGGTTGCGGTTGGCGAACAATGTTGTTGGTGGTATGACGTTTGTGATGTTGGCTAGGGTTACGGGATCACAAAGTGCTAGTGAGAAGAATGCGTATGAAGATAAGGAGAAGAAGTCGTCATGA 1152 49.57 MLFITYNYHHTLFVKNLTIDSFIHRLHCPFLKINSYQTMASVNHLHHSPLAGNNRRFNRHIHFSGLRSPPLAGKTLVDFTGLSLRSKSINPNLLSNQQHITPCATGGGGGTGVRHGGGSGGDGGDGHRSGGNSDDSSMSSSINSFGPIGAFLNGWRSRVSADPQFPFKVLMEEVVGVSATVFGDMATRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTVTSASATLPWIFTNSPTSHMFEPGAYTLANRLGTFVYKGTLFAAVGFAAGLVGTALSNGLIMVRKRMDPGFESPNNAPPTVLNAVTWAVHMGLSANLRYQSLNGVEFVLAKGLPPLLFKGAVFGLRLANNVVGGMTFVMLARVTGSQSASEKNAYEDKEKKSS 383
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr6g02278 383 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 88 371 - -
Ftr6g02278 383 MobiDBLite consensus disorder prediction 104 139 - -
Ftr6g02278 383 Pfam Protein RETICULATA-related 158 325 IPR021825 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr6g02278 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
401688 Ftr2g00836 Ftr6g02278
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2818078 Ftr Ftr2g00836 Ftr-Chr2:15785332 Ftr6g02278 Ftr-Chr6:89568233
2838187 Ftr Ftr6g02277 Ftr-Chr6:89568233 Ftr6g02278 Ftr-Chr6:89568233