AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr6g02282 ATGGACATCGAGAAGAAAGACGAACAGCCTCTCCGATCCACCACCACCACCACCACCGCTACCGTCGCCGGCGACCACTCGAAACACCTCAAACGCCGGCGACGACGCATCATCATCTGCTCATCGATCATCGGATTCATCATCACCATCGCTCTAATCCTCCTAATCTTATCTCTCACCGTCTTCAAAGCCAAAAAGCCGATCGTCACCGTCAACTCCGTCGCACTGCAAGATCTGGATTTCTCCATCAATCCTCTCGCACTTAGGGTTTCGTTGAACCTCTCGCTAGCCCTAGGGATCACCATCACGAACCGTAATAAGGTCGGTGTGAGCTACAGCAACAGCTCCGCTGTTCTCCGGTACAGAGGCAAAGACGTCGGAGATGTGCCGATTCCGGCAGGTAAAATTGGCTCCGATGACTCGGAGAAGTTGAATCTGACGCTGACGATCTTTGCTGATCGGTTGCTTGCGGATTCGGAGATTTACAGTGATGTTATTGGAGGTAAGTTGCCTCTTTCGACTTATGCTCGAATCAAAGCGAAAGTTCGTGTGGTTTTCTTTCGGATTCACGTCGTATCGACGTCGAATTGCGATCTGAATGTTGATTTGCGAAATAGAGGTGTTGCGAATCAAACTTGTCATTATGATAACAAATTGGATTGA 663 49.32 MDIEKKDEQPLRSTTTTTTATVAGDHSKHLKRRRRRIIICSSIIGFIITIALILLILSLTVFKAKKPIVTVNSVALQDLDFSINPLALRVSLNLSLALGITITNRNKVGVSYSNSSAVLRYRGKDVGDVPIPAGKIGSDDSEKLNLTLTIFADRLLADSEIYSDVIGGKLPLSTYARIKAKVRVVFFRIHVVSTSNCDLNVDLRNRGVANQTCHYDNKLD 220
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr6g02282 220 Pfam Late embryogenesis abundant protein 100 191 IPR004864 -
Ftr6g02282 220 SUPERFAMILY LEA14-like 52 156 - -
Ftr6g02282 220 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 26 204 - -
Ftr6g02282 220 Gene3D - 54 203 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr6g02282 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
401687 Ftr2g00825 Ftr6g02282
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2827734 Ftr Ftr5g02692 Ftr-Chr5:100644140 Ftr6g02282 Ftr-Chr6:89590706
3036875 Ftr Ftr2g00825 Ftr-Chr2:15565205 Ftr6g02282 Ftr-Chr6:89590706