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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr6g02335 ATGGATAAAGAGGCTGGTGCAATAGCGGCTCTTAAAGGTTCCTCATCAAAGAAGAAAAGTAGTGTGGATGCTGATAAGATGGCTGCGTTGACTGCATGGCACAGGGTTGACTGCAGAACTAGAGATGCATTTCGTCGCAGCTTCCTTCCAGAACTTGTTAACGGTTTTGAGGAGAACATTCGGGCCTTTGTCTCAGAGGCAGCTAATGAGGAGGTTCTTGTGATGTATGCCCAAGATCCTTTCCATAGGCTGTTACTTCATGGTGTTTGTGAGTTCTACAATTTGGTGTCTATGACGGAGTCTGAGACCAAAGGTACAAAGGTCTTGAAGATGACCAAAATCAAGAAGAAAAAGTCAGGCAACAACGAACTCCCGACCATCACCCTTTGCGAGTTCCTGAAAATGGCAAAAGATGGTTTTTGGTAG 426 45.07 MDKEAGAIAALKGSSSKKKSSVDADKMAALTAWHRVDCRTRDAFRRSFLPELVNGFEENIRAFVSEAANEEVLVMYAQDPFHRLLLHGVCEFYNLVSMTESETKGTKVLKMTKIKKKKSGNNELPTITLCEFLKMAKDGFW 141
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr6g02335 141 CDD R3H 56 107 - -
Ftr6g02335 141 SUPERFAMILY R3H domain 33 112 IPR036867 GO:0003676(InterPro)
Ftr6g02335 141 PANTHER R3H DOMAIN-CONTAINING PROTEIN 4 1 139 IPR039629 -
Ftr6g02335 141 Gene3D - 46 139 IPR036867 GO:0003676(InterPro)
Ftr6g02335 141 ProSiteProfiles R3H domain profile. 50 118 IPR001374 GO:0003676(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr6g02335 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
401679 Ftr2g00625 Ftr6g02335
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr2:11264931 Ftr6g02335 Ftr-Chr6:90246082 wgd