AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr6g02346 ATGCTCAACATCTTCAACAAAAACTTCCGGCGACTCTGCTCAAAGCTCCGGTGGCCGGTGCGCCGACGTGCAAAGCCCAAAGTCATCATCAAAAGGTTCGGAAAGTCAAACTCTAGAGGTCAAGATTCATCAATCACAAATGGGTCAGCGACAATTCACCCAAATAATCATTTGGGTGTTTCGAAATCTGAAAACCCAATTCGAATTGCAACGTTTAATGCTGCTTTGTTCTCCATGGCACCAGCAGTTCCAGAGTTGACTAAAAAAGCTTCAAGCTTTGACTATGGTGAAGATGATAAAGATTGCACAAAGGTAACCTCTGATTCTTCAGTTTCTTACGGCAATTCGAGATCAAAATCAATGGTTGATCGACCCAAAAGTATATTGAAACAATCACCATTGCATTCAAGCTCCATTGGTAGCTCAAAAACTCAATCAAAACAGCAGAAATTTGCAAAGTCAAAGCTGAGAGTGTCTATAAACTTACCTGATAATGAGATCTCATTGAGGCGAAGTGGGCAATTGAGCTATGTTTTAGATGAAAACGAAACTGACCCGAGTTCGAAAACTAGTAGTTCTAAGGGTATAAGCAAGATTTTGAAAGGAAAGGGTGTTTTGAGATCACAAAACAGTTTTTCTTCAAGAGAAGTTGAAAGTCAAAGGGGAAGTTATCGGTCAACGAAGACTGTTCTTGAGGTTTTGAGAGAATTGGATGCAGATATATTGGCTTTACAGGATGTAAAAGCTGAAGAAGAAAAGGATATGAAGCCATTGTCTGATCTTGCTGCTGCATTGGGTATGAATTATGTTTTTGCAGAGAGTTGGGCACCTGAATATGGTAATGCAGTGCTATCGAAATGGCCGATTAAACGATCCAAAGTTCAGAAGATTTTTGATGATTCTGATTTCAGGAATGTTTTAAAGGCGACAATTGATGTTCCCCAAATCGGAGAAGTTGATTTTCATTGTACCCTTCTTGATCATCTTGATGAGAACTGGCGAATGAAACAGATAAATGCAATAATCGAATCTAATGACAGACCACACATCTTAGCCGGAGGTATCAACTCTCTTGATGAAACAGATTACTCGCCCGAAAGATGGACCGACATTGTTAAGTACTATGAAGAAATGGGAAAACCGACACCAAAAGTTGAAGTGATGAAGTACTTAAAGGACAAACAGTACAGCGACGCTAAGGATTGTGCAGGCGAATGTGAATCTGTGGTCATTATCGCTAAAGGCCAAAATGTGCAGGGTACTTGCAAATACGGTACAAGGGTAGATTACATATTGGTGTCCCCTGATTCTCCCTACAAGTTTGTTCCTGGTTCATATATGGTTCTATCATCAAAGGGTACTTCTGACCATCATATAGTCAAAGTTGATGTAACTAGGGTAGATGAATCTGGTCAACAACCGTACATTAGGAGGCCGCAACGACATCCTAAACAAAAGGTTGTGAAGATTATGAATTCTAATTCGTCAAAAGGGGTATGGAAAATGCAAACTTTAGACAGATAG 1524 39.96 MLNIFNKNFRRLCSKLRWPVRRRAKPKVIIKRFGKSNSRGQDSSITNGSATIHPNNHLGVSKSENPIRIATFNAALFSMAPAVPELTKKASSFDYGEDDKDCTKVTSDSSVSYGNSRSKSMVDRPKSILKQSPLHSSSIGSSKTQSKQQKFAKSKLRVSINLPDNEISLRRSGQLSYVLDENETDPSSKTSSSKGISKILKGKGVLRSQNSFSSREVESQRGSYRSTKTVLEVLRELDADILALQDVKAEEEKDMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRSKVQKIFDDSDFRNVLKATIDVPQIGEVDFHCTLLDHLDENWRMKQINAIIESNDRPHILAGGINSLDETDYSPERWTDIVKYYEEMGKPTPKVEVMKYLKDKQYSDAKDCAGECESVVIIAKGQNVQGTCKYGTRVDYILVSPDSPYKFVPGSYMVLSSKGTSDHHIVKVDVTRVDESGQQPYIRRPQRHPKQKVVKIMNSNSSKGVWKMQTLDR 507
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr6g02346 507 MobiDBLite consensus disorder prediction 130 155 - -
Ftr6g02346 507 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 16 463 IPR051916 GO:0005783(PANTHER)|GO:0006506(PANTHER)
Ftr6g02346 507 FunFam Endonuclease-exonuclease-phosphatase family protein 214 467 - -
Ftr6g02346 507 Gene3D Endonuclease-exonuclease-phosphatase 210 466 IPR036691 -
Ftr6g02346 507 Pfam Endonuclease-Exonuclease-phosphatase family 222 457 IPR005135 GO:0003824(InterPro)
Ftr6g02346 507 MobiDBLite consensus disorder prediction 35 59 - -
Ftr6g02346 507 Coils Coil 234 254 - -
Ftr6g02346 507 MobiDBLite consensus disorder prediction 36 59 - -
Ftr6g02346 507 MobiDBLite consensus disorder prediction 106 122 - -
Ftr6g02346 507 SUPERFAMILY DNase I-like 227 464 IPR036691 -
Ftr6g02346 507 MobiDBLite consensus disorder prediction 95 155 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr6g02346 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
401673 Ftr2g00599 Ftr6g02346
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr6:90413526 Ftr8g00606 Ftr-Chr8:6739028 dispersed
Ftr Ftr-Chr2:10712530 Ftr6g02346 Ftr-Chr6:90413526 wgd