Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glco1g01626	ATGGACCTGTACTCAACCTTCGTCGTTCACAGCGACGATGAAGACGACAATCAAAACGACGACGAATCGCTCCCTCCTCTTCTCAAAATGCTCCCCAAAGACTTCGGCGCCGCCGTTGATTCCGATGACGACGACGACGCCAGCATCTCAGGCACCATGATCGTCAAGCGCGTGAACACCACGCGCCATTCCACGCGCCGCGAAGATAACGAGAGCATTTCCGGTACTATGATTGTGAAAACTAACCCTAGGCGCGTGGATTACACGCGCCGGAGAAATGATGATGAGGAAGAGGATGATGAGGATGAGGAGGGAGGGGGATTTGGGACGTTTGTGGTGAGAGATGATGAGGATGAGGAGGAGTCTGTGTCGGGGACTTTTGTGAGACGGAGTGTGGGAGGTGGAGGAGGAGGAGGGGGAATGTCGACGATGAGTAGAGCTGTCGCGAGTATGCAGGGAGTAGGGGAGGGGTTTGGGAAAGGGAGGGGGAATGACGGTGGGGACGGTGGGCATTCTAGAAAACGGACGAGTAAAATGTCGTCTGGTTCCATTGCGGATAGTATTACTAGAGAGGATCCGTCTACTAAGTATGAATTGCTTCATGAACTTGGAAAAGGTTCTTATGGGTCTGTCTACAAAGCTCGTGATTTAAAAACATCGGAAATGGTTGCAATTAAAGTGATATCATTGTCTGAAGGGGAAGAAGGGTATGAAGAAATTCGTGGTGAAATAGAGATGTTGCAGCAATGCAGTCATCCTAATGTTGTTCGTTATCTAGGAAGCTACCAGGGTGAGGAGTACCTCTGGATTGTAATGGAGTATTGTGGTGGAGGAAGTGTTGCTGATTTAATGAATGTTACAGATGAGCCTCTAGAGGAGTACCAAATCGCATATATATGCAAGGAAGCATTGAAGGGCTTATCCTATCTGCACTCGATTTTTAAGGTGCATCGTGATATCAAGGGTGGTAATATCTTGTTGACTGAACAAGGAGAGGTGAAGTTGGGTGATTTCGGTGTTGCTGCACAGCTGACAAGGACGATGTCCAAGCGCAATACGTTTATTGGTACTCCCCACTGGATGGCTCCTGAGGTTATCCAGGAGAGTCGATATGATGGGAAGGTGGACGTGTGGGCTCTTGGGGTGTCTGCAATCGAAATGGCAGAGGGCCTTCCTCCAAGATCAAATGTACATCCAATGAGGGTGTTATTTATGATCTCCATCGAGCCCGCTCCAATGCTTGAAGATAAAGAAAAATGGTCTCTTGTGTTCCATGATTTCATTGCAAAATGCCTTACAAAAGACCCTCGTATACGTCCCACTGCATCTGAGCTACTAAAGCATAAATTTATAGAAAAATGCAAAAGTGGAGCTTCTGCAATGGTGCCAAAGCTTGAGAAGGCAAAGATAAATAGGGCTGCAATGGCATTGGAAGCAGAACACGTTTCTGAGACCATACCGGGATATGGGACACTTGGACCTAGAGTGAACGAAGACTTTGGAGATACTGTCCCTTCTAAGCCTCATCAAGTGCCTAATGGAGTACCTGCTGTGGGTGCTACAGTAAAAGCCGGTGGTTTGGAAGAGGCTGAAGAAGGTGATTTCAGAAGTGTTATAATTCATGGTGGAGTGGATATACATAAGACAGCTGCTAAAACACCACTTCCAGCAGCAAAGGACCCCTCACACTCTTCAGCACATGGTCAAAGTTTATCAATGGCTGATCCAGGAGAAGATTCAGTTAGTCCCTGGTTGACCAAAAAAGTTGGGGCATCTGCAGATACATTTCGTGCTGTTGAATCACCATCTACTGAACCCAAACCACAAGCTATTGGAAGCAATGGTGCTTTTGTCGGTGGCACAACTAAGAACGAAGGTGTTAATCGCAAAGCACTAGACAAGCTTTGGTCCATATATGCCGCTGGTAACACAGTGCCCATTCCGTTTTTGAGGGCGACGGATATATCTCCCATTGCATTGTTGTCTGAGAATGTGCTTGGAAGTCAGCATGTCGATAATGTTGACAATGTTGCTGTAGAAGCATTGCAAGAGCTTTTCACAAGTGATGCACAGTCTAAAAAGGGCCGAAGACAAAATGAGCTGCTTCCACCAAGTGTCTATCAGAGACTCACTTCAAGTCCAACATTGATGAATCTTGCACAGGCTTTATCATATCATAAAATGTGCTACGAAGAGATGCCATTGCAAGAACTACAAGCAACTCAGGAACAGCAAACCATTCAGAACCTTTGTGACACCCTTAGAACTATTTTACGGTTATAA	2283	46.39	MDLYSTFVVHSDDEDDNQNDDESLPPLLKMLPKDFGAAVDSDDDDDASISGTMIVKRVNTTRHSTRREDNESISGTMIVKTNPRRVDYTRRRNDDEEEDDEDEEGGGFGTFVVRDDEDEEESVSGTFVRRSVGGGGGGGGMSTMSRAVASMQGVGEGFGKGRGNDGGDGGHSRKRTSKMSSGSIADSITREDPSTKYELLHELGKGSYGSVYKARDLKTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTDEPLEEYQIAYICKEALKGLSYLHSIFKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSNVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFIAKCLTKDPRIRPTASELLKHKFIEKCKSGASAMVPKLEKAKINRAAMALEAEHVSETIPGYGTLGPRVNEDFGDTVPSKPHQVPNGVPAVGATVKAGGLEEAEEGDFRSVIIHGGVDIHKTAAKTPLPAAKDPSHSSAHGQSLSMADPGEDSVSPWLTKKVGASADTFRAVESPSTEPKPQAIGSNGAFVGGTTKNEGVNRKALDKLWSIYAAGNTVPIPFLRATDISPIALLSENVLGSQHVDNVDNVAVEALQELFTSDAQSKKGRRQNELLPPSVYQRLTSSPTLMNLAQALSYHKMCYEEMPLQELQATQEQQTIQNLCDTLRTILRL	760

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glco1g01626	760	MobiDBLite	consensus disorder prediction	176	190	-	-
	Glco1g01626	760	ProSitePatterns	Protein kinases ATP-binding region signature.	203	226	IPR017441	GO:0005524(InterPro)
	Glco1g01626	760	MobiDBLite	consensus disorder prediction	1	26	-	-
	Glco1g01626	760	MobiDBLite	consensus disorder prediction	84	192	-	-
	Glco1g01626	760	ProSiteProfiles	Protein kinase domain profile.	197	451	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)
	Glco1g01626	760	Gene3D	Transferase(Phosphotransferase) domain 1	193	485	-	-
	Glco1g01626	760	MobiDBLite	consensus disorder prediction	554	617	-	-
	Glco1g01626	760	CDD	STKc-MAP4K3-like	196	451	-	-
	Glco1g01626	760	Pfam	Protein kinase domain	197	451	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)
	Glco1g01626	760	SUPERFAMILY	Protein kinase-like (PK-like)	196	452	IPR011009	-
	Glco1g01626	760	PANTHER	SERINE-THREONINE-PROTEIN KINASE TAO	172	484	IPR050285	GO:0006468(PANTHER)\|GO:0035556(PANTHER)\|GO:0043408(PANTHER)
	Glco1g01626	760	FunFam	serine-threonine-protein kinase dst1 isoform X1	194	485	-	-
	Glco1g01626	760	FunFam	Aurora kinase A	189	278	-	-
	Glco1g01626	760	SMART	serkin-6	197	451	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Glco1g01626	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	3093118	Glco	Glco1g01626	Glco-Chr1:80691385	Glco8g02255	Glco-Chr8:119556756
	3180797	Glco	Glco9g04011	Glco-Chr9:502299337	Glco1g01626	Glco-Chr1:80691385
	3188342	Glco	Glco1g01626	Glco-Chr1:80691385	Glco7g01935	Glco-Chr7:333441989

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glco1g00664	.	40	709	MAP Kinase Kinase Kinase Kinase Protein gene family	AT4G10730	63.501	0.0	915.0
	Glco1g01626	.	19	836	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G69220	59.36	0.0	870.0
	Glco2g03272	ACH	7	673	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	62.573	0.0	861.0
	Glco4g05987	.	5	683	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G79640	53.161	0.0	693.0
	Glco7g01935	ACH	6	674	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	62.059	0.0	820.0
	Glco8g02255	ACH	6	673	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	62.697	0.0	843.0
	Glco9g04011	.	1	690	MAP Kinase Kinase Kinase Kinase Protein gene family	AT3G15220	62.764	0.0	838.0
	Glco10000562.1g00009	.	418	500	MAP Kinase Kinase Kinase Kinase Protein gene family	AT3G15220	55.952	1.26e-20	83.6

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Glco	Pkinase	1.3e-69	CL0016		PK	STE_STE20-Pl