AGRP Logo

AGRP

Asteraceae Genomic Research Platform

AGRP Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco1g01642 ATGGATGAACCTCAAAGTATAGTTGAAGAATGGAGTGGAACATCTTCAAACAAACTCACATTAACCGCCGTTATCTCTCCGTCATCATCTCCGTCACATTACACCGTTAAATCACACGGCAACCGATTCAACCTCTTTTCTACAAGGCTCCTACAAGCATTTGTTCCTGAGGGGTTTCCGAGTAGTGTCACTCCAGATTACATTCCTTTTCAGACATGGGATCTATTGCAGGGACTTTCGACATACATAAGGATGATGCTCTCCACACAAGCTCTTTTAAGTGCTATAGGAGTCGGGGAGAAATCTGCAACTGTTATTGGCGCTACTTTTCAGTGGTTTTTGAGGGATTTAACTGGAATGCTTGGAGGTGTCATGTTCACATTCTATCAGGGCTCTAATCTAGACAGCAATGCGAAAATGTGGCGTTTGGTTGCAGATCTCATGAATGATCTTGGAATGCTGATGGACCTTCTATCTCCATTGTTTCCTTCGGCATTTGTCTTTATTGTCTGCATAGGGAGCTTATCAAGATCTTTCACTGGTGTTGCCAGTGGAGCAACTAGAGCTGCTTTGACTCAGCATTTCGCTCTTCAAAATAACGCAGCAGATATATCTGCAAAGGAAGGAAGTCAGGAAACGGTTGCAACTATGATTGGAATGGCTTTAGGAATGCTTCTTGCACACATTACAATGGGACACTCAACAATCATATGGTTCTCTTTTCTGTCTCTCACCATGTTCCACATGTATGCTAATTACAAAGCTGTTAGGTGCCTTAATCTGACTACGTTAAACTGTGAAAGAGGCTCAATCCTTTTGAGGCATTTTATGGAGACTGGTGAAGTTCTCTCTCCCAAAGAAGTATCAGTCTCGGAGCATGTCTTACCATTATGGATCAGCTCTTGGGGATCAAAGAATAGCAAATTTTTGGATACACATGTACGGTTAGGTGTCAGGGTTTCCACACTAAACAGCCTAGAAACGATGGAGTTGTTAAGTGCTGCTGGATCTCGATACGAGAATGCAAAATATCTGTTAATTGAGAGGAAAGGAATTGTCAGCATTGTTATGCATAAAGATTCAACTACTGGAGATGTAATGCGCGGGTTCATTCATGCTATTGTCATGGCAAATCTTTTCTACAGTAAGCCTACATCATTACACACAGATAGCCAAACATGGATGGACAAACACTACGAATCCTTTCTTTTGAAGCTCCAATCCTCAGGCTGGAAAACAGAACGCCTTTTGTCATCATCAATCATCTGGAGGGCAAACTGGATTCACGGCGTTCCAGATAAAAAGATAAACTAG 1314 42.01 MDEPQSIVEEWSGTSSNKLTLTAVISPSSSPSHYTVKSHGNRFNLFSTRLLQAFVPEGFPSSVTPDYIPFQTWDLLQGLSTYIRMMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGVMFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLLSPLFPSAFVFIVCIGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMIGMALGMLLAHITMGHSTIIWFSFLSLTMFHMYANYKAVRCLNLTTLNCERGSILLRHFMETGEVLSPKEVSVSEHVLPLWISSWGSKNSKFLDTHVRLGVRVSTLNSLETMELLSAAGSRYENAKYLLIERKGIVSIVMHKDSTTGDVMRGFIHAIVMANLFYSKPTSLHTDSQTWMDKHYESFLLKLQSSGWKTERLLSSSIIWRANWIHGVPDKKIN 437
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco1g01642 437 PANTHER RUS1 FAMILY PROTEIN C16ORF58 6 420 IPR006968 -
Glco1g01642 437 Pfam Vitamin B6 photo-protection and homoeostasis 46 279 IPR054549 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco1g01642 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr1:81211601 Glco5g00581 Glco-Chr5:23562905 dispersed