Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glco3g00110	ATGGATTTTGAGTTGAGAAGGGCAAGGGAGAAGCTAGAAAAGGAGCAAAAAGATCGAAAAGAAAAAGCGAAGCAAAGATTGGAGAAAGAACGAAAAGCTAAGCTAGAAGCTGCTCGACAGCGTGAAGCTATCGAGGCTTCTCAAAGATCTAGACGTATTCATGCTTTCGAGGCTCAACTTAAGGCAGATCAGCAGATGGAAGAGGACATTTTTTCCGGAAGAGGAATTTCTTTTACTCGTGTTTTAGAAGCAGTACCTTTTGATGGTTCTGGAGATAAGATCAAACTACCAAATTCATGTTTCAACGATTTATCCGGTGAAGGTGCCTTTGAAAAAGGCCCGCTTCATTTCCAGTTGTCAGTAGCTGACAAAGATAAGTCTTCAAAGTCAGACCACGTGTCAACCCATGCCGCCGGAGTCTTGGAATTTAGTGCTGAAGAAGGTACTGTCGGGATTCCACCTCACATTTGGAATAACTTGTACTCTAAACAAGATCCAATGACTCCATTAATTGAAGTGAAGTACGTCTGGTTAGCAAAGGGAACGTATGCAAAGCTTCAATCAGAAGAACTCGGGTTCTCAGATATACCAAACCACAAAGCTGTTCTTGAAACCACCCTTCGCCAGCACGCGACTTTATCTGAAAATGAAGTTTTAACTGTCAAACATGGCGTGTTGACTTATCATCTACGTGTACTTGAGCTGAAACCCTCACCAAGTGTATCTGTTCTTGAAACAGATATTGAAGTCGACATTATGGGTCCCGATACACTTCCTGAAAAACCCAACAATCAACATGTTCTCAAACCACTAACATTCGGGAAATCAGAATCTGGTGTTATTAATGAAGGGGAATACGTTTATTACAAATTTTCAGTAGATGGTGATACATGGGGTATAATTAGTCGAGGAGATGCTGAAATTGAAGTGAAGTTAGATTCAGAAGCTAAAGATGGAGATACTGATCTTTACCTTTCACGACACCCGCTATTATTCCCAAACACGCACCAACATGGTTGGTCTAGCCATGACATGGGCTCAAAATGCTTAGTTCTTGGGTCAAAGGACCAGAACCTGGGTGCTGGAACTTACAGTGTCGGTGTATATGGCTTCAAAGGAACCACAAAATACAGCATTATCGTATCCGTGCAAGATACTTCCAACTCAAATGTGGGTCAACAACCTGTGTCTGCAGCTTCGTCTTCATCAACAGCGGATACTGTAGAATGCAGCAATTGCAAACATTATATACCCTTGAGAACCATAGCACTTCACGAGGCGTATTGCAGGAGACATAATGTTGTTTGTCAACATGAGGGATGTGGTATAGTGTTGAGGACTGGAGAGGTTAAGAACCATATTCATTGCGAGAAATGTGGACTGGCTTTTCATAGTGGCGAGATTGAGAAACATATGAAAGTGTTCCACGAGCCGCTAACTTGTCCGTGTGGGGTCATCCTTGAGAAGACGCAGATGGTGCAACACCAGTCTGCAGAGTGTGCCTTACGTCTTGTGACATGCCGATTTTGTGGAGACATGGTACAAGCTGGTTCTGTAGCTGCTGATACACGAGACCGGTTAAGAGGACTATCAGAGCACGAGAGTCTGTGTGGGTCCAGAACCGCCCCATGTGACTCTTGTGGTCGGTCTGTCATGTTGAAGGAAATGGACATTCATCAAGTAGCTGTTCATCAGAAGAGTTGA	1704	43.43	MDFELRRAREKLEKEQKDRKEKAKQRLEKERKAKLEAARQREAIEASQRSRRIHAFEAQLKADQQMEEDIFSGRGISFTRVLEAVPFDGSGDKIKLPNSCFNDLSGEGAFEKGPLHFQLSVADKDKSSKSDHVSTHAAGVLEFSAEEGTVGIPPHIWNNLYSKQDPMTPLIEVKYVWLAKGTYAKLQSEELGFSDIPNHKAVLETTLRQHATLSENEVLTVKHGVLTYHLRVLELKPSPSVSVLETDIEVDIMGPDTLPEKPNNQHVLKPLTFGKSESGVINEGEYVYYKFSVDGDTWGIISRGDAEIEVKLDSEAKDGDTDLYLSRHPLLFPNTHQHGWSSHDMGSKCLVLGSKDQNLGAGTYSVGVYGFKGTTKYSIIVSVQDTSNSNVGQQPVSAASSSSTADTVECSNCKHYIPLRTIALHEAYCRRHNVVCQHEGCGIVLRTGEVKNHIHCEKCGLAFHSGEIEKHMKVFHEPLTCPCGVILEKTQMVQHQSAECALRLVTCRFCGDMVQAGSVAADTRDRLRGLSEHESLCGSRTAPCDSCGRSVMLKEMDIHQVAVHQKS	567

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glco3g00110	567	Gene3D	-	275	389	-	-
	Glco3g00110	567	Pfam	Ubiquitin fusion degradation protein UFD1	90	255	IPR004854	GO:0006511(InterPro)
	Glco3g00110	567	Gene3D	-	75	178	IPR042299	-
	Glco3g00110	567	Gene3D	Zinc-RING finger domain, C3HC4 (zinc finger)	475	526	IPR013083	-
	Glco3g00110	567	Pfam	TRAFD1-XAF1, zinc finger	530	559	IPR049439	-
	Glco3g00110	567	MobiDBLite	consensus disorder prediction	1	49	-	-
	Glco3g00110	567	Coils	Coil	5	40	-	-
	Glco3g00110	567	SUPERFAMILY	TRAF domain-like	408	455	-	-
	Glco3g00110	567	Gene3D	-	180	253	-	-
	Glco3g00110	567	PANTHER	UBIQUITIN FUSION DEGRADATON PROTEIN 1	1	539	IPR004854	GO:0006511(InterPro)\|GO:0030433(PANTHER)\|GO:0031593(PANTHER)\|GO:0034098(PANTHER)\|GO:0071712(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Glco3g00110	K14016	ubiquitin fusion degradation protein 1

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Glco	Glco-Chr3:8231753	Glco5g00009	Glco-Chr5:495019	dispersed