AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g00114 ATGGAGAACGAGGTGATCACGTTAGCAGATGCAGCGTACCATGCTAACAAGGTGTCAGTTGTGACACCATCGTCCTCAAGAGGTCCTCAAGTGATGTTGCTGTATAGTGTTCCCTTGTTATCGGCCTTGCTTGCGTTCGCCATTGCTCAATTTCTCAAAGTCATCACTACTTGGTATAAGGAAAAGAGATGGGATCCTAAAAAGATTGTCGGCTCAGGTGGAATGCCATCGTCTCATTCTTCAACTGTCGTGGCACTTGCAGTATCTATTGGTCTGCACGAGGGACTTGATTCATCATCGTTTGCAATTGCTCTGGTCATGGCTTTTATTGTTATGTATGATGCAACTGGAGTCAGACTCCATGCTGGTCGCCAAGCTGAAGTGTTGAACCAGATAGTGTGCGAATTTCCTCCGGAGCACCCTTTATCCACATCCATACCCCTACGTGATTCGCTTGGGCATACTCCAGTACAGGTGGTTGCAGGGGCCGTTCTAGGATGCATAGTGGCACTCGTGATGAAAGCAACTGACTAG 534 47.75 MENEVITLADAAYHANKVSVVTPSSSRGPQVMLLYSVPLLSALLAFAIAQFLKVITTWYKEKRWDPKKIVGSGGMPSSHSSTVVALAVSIGLHEGLDSSSFAIALVMAFIVMYDATGVRLHAGRQAEVLNQIVCEFPPEHPLSTSIPLRDSLGHTPVQVVAGAVLGCIVALVMKATD 177
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g00114 177 Pfam Divergent PAP2 family 38 169 IPR003832 -
Glco3g00114 177 CDD PAP2-like 39 172 - -
Glco3g00114 177 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 19 175 IPR003832 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g00114 K09775 uncharacterized protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr1:158274152 Glco3g00114 Glco-Chr3:8273015 dispersed
Glco Glco-Chr3:8273015 Glco6g01004 Glco-Chr6:54233696 dispersed