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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g00123 ATGGCAATAAGCAATAACAACAACAAATCAGCAGCTTATTTAATAGTGAAGGTGATCATAACATTAATAGGAATAAGTATGGTTGCTTATTTGATTGCTCCTCCTTTATATTGGCATCTTCTTGAAGCTCTGAATCCTGTATCTTCTTCTTCTTCTTGCCCTGTTTGCAACTGTGATTGTGATTCTCAGCCTCTTCTCTCTATTCCCAAAGCGCTAAGCAACGGTTCATTCACAGATTGTGCAAAGCATGATCCTGAAGTAAGTGCAGACACAGAAAAGAATTTCGTCGAGCTTCTCTCTGAAGAATTAAAGCTACGTGAAGCCGAAGCTTTAGAAAGTCAACAACGTGCTGACATGGCACTTCTCGAGGCCAAGAAGTTAACCTCCCAATATCAAAAAGAAGCAGACAAGTGTAATTCAGGAATGGAAACTTGTGAAGAAGCTCGTGAAAAAGCCGAAGCAGCTTTACTAGCACAAAAACAACAAAGTGAAATGTGGGAATTAAGAGCGAAACAAAGGGGTTGGAAAGAAGGCAGTACCAAGTCTGTAAACTCTGCCTGA 561 40.29 MAISNNNNKSAAYLIVKVIITLIGISMVAYLIAPPLYWHLLEALNPVSSSSSCPVCNCDCDSQPLLSIPKALSNGSFTDCAKHDPEVSADTEKNFVELLSEELKLREAEALESQQRADMALLEAKKLTSQYQKEADKCNSGMETCEEAREKAEAALLAQKQQSEMWELRAKQRGWKEGSTKSVNSA 186
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g00123 186 Coils Coil 105 125 - -
Glco3g00123 186 Pfam Protein of unknown function (DUF1068) 15 178 IPR010471 -
Glco3g00123 186 PANTHER EXPRESSED PROTEIN 14 183 - -
Glco3g00123 186 Coils Coil 142 162 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g00123 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
99381 Glco3g00123 Glco7g06598
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr3:8777478 Glco9g05361 Glco-Chr9:567755303 dispersed
Glco Glco-Chr3:8777478 Glco7g06598 Glco-Chr7:567578229 wgd