Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glco3g00163	ATGGAAGTGAAAGACAAAATCAAAGTACTAGTCACAGTGTCATGTGTTACTGTACTTGCATCTCTTATCAAAATGTTACTGAACAGAAGAAGAGACAGAACAAGACTTAAAGAGGATTTAAGTTCATGTTATTTGAAAACAGAGGATCATAATAAATGTCAGCTTATGTTTAAATGTGTCTTGGCTAATAATTCTTATGCCCCTTTTAAGCATTTCAAATTTCATGACAATTCTACGGATTTGCATCCCTATGAGTCGGAGATTAAGGCTCTCTTGGAGAAACCACAGCTAGATGTTGAATTTTCTAACGGTACGATGTGTGACATGAAGGATACATATGTTTGGGTCGATGATGAAGTGAAGTTGAAACAGCTTGTTGAGGTTTTGAGTAAAGAAAGAGTGTTTGCCGTGGATACTGAACAACATAGTTTACGTTCATTCTTAGGGTTTACAGCTCTTATTCAGATTTCTACAAGAGATGAAGATTATTTGGTGGACACCATTGCTGTTCATGACGTTATGGGAATTCTCGGCCCCGTATTTGCCAATCCCAATATATGCAAGGTGTTTCATGGCGCTGATAACGATGTCGTATGGCTACAAAGGGATTATCACATCTATGTTGTAAACTTATTTGACACTGCCAAGGCATGTGACGTGTTATCAAAACCACAGAGATCATTAGCATACTTACTTGAAACATATTGTGCTGTCATCACTAACAAGTTTTACCAGCGTGAAGATTGGCGACAACGTCCACTGCCAAAAGATATGATTGAATATGCTCGGATGGATGCACACTATTTGCTTTATATTGCGGATTGTCTTGTTTCGGAGCTCAAACACCAGAAAACCGAAAATTCAGCCCATCTCGATGACAACAAACTCGATTTTGTTTACGAGGCCAGCCGGCGTTCCAATGCTGTTTGTCTGCAACTATTCACTAAAGAACTAGAAGCTTCCCCGGGGCAGTCTGCTGCTTCTTCAATTATTTCCCGGCACTTGAATGATCCTGGAAGTTCTATAGACAATAGTCAGTTTCAGGGTATCGTCAGACGCCTATGCTGTTGGAGGGATTTCATGGCCCGTATGCATGATGAGAGCCTTAAATACGTACTATCCGATAATGCTATTGTCGCGCTTGCCGAAAAAGTACCATTGAACGAAACAGATATTTCCACTACAATATCACAAGCTGATACACATCTTGGCTCTCTTAATCCAGATTCTACGACTCGTAATCCATCCTCCGTAGTTTTAAGTCATTTGGCTGATTTCGGTTTTCTTCTTCAAGGTGAACTACAGAATCCTGATGAAATATTACAACTCTATATCAAGAAGCATCTTGGGCCTAATGGTTCTTGTCCTTTATCTCTTTACAACTACGGTCTACTGTCGAAAAACAGTATTAAAGTGCCAAAGAGATTAGTTTCAAAAGCAAATGGATATAAATTTTCAAAACAGGTTGCTAGGAAGGCTTCTCGAGAGCTTTTTGTTCAGAAGTTTTCTTGTAAATCGCCAGTTTATCACAATTGCAGGATATATGCTAATGATGGACGATTGTTATGTTACTGTGATCGAAGGAAGTTAGAATGGTATTTGCAGAGAGATCTGGCAAAACTTGTTGACGAAGATCCACCAGCCATAATGCTTCTCTTTGAACCTAAAGGCCGGCCAGAAGATGAAGGAAATGATTTCTATATACAGAGCAAGAAAAATATATGCGTAGGCTGTGGTGAAGGAAACCACTACTTACGCTACCGTATCATCCCATCATGTTATAGAATACACTTCCCTGAACATTTAAAAAGCCACCGCTCTCACGATATTGTTCTAGTTTGTGTCGATTGTCATGAAAAAGCACACTCTTTTGCTGAAAAGTATAAGAAGAAAGTAGCTTCGGACTATGGGATACCGTTATTTGTACACAAAGTGGTTAATTCTAGCGAGGGAGATGGTGTTTCTGGAGGTTCTACGTCTGTTATGAAACTTGGTGATGGGGGTGTGTCTCCTTTAGAGTTGCGTACGGCTGCGATGGCTCTATTGAGGCATGGGCCAAGGATGCCTCCTCAGCGTCGTGAGGAATTGACACAGGTTGTCAGGAAGTATTACGGAGGGCGTGAAATATCGGATGAAGACTTGGAAAATGCTTTACTAGTTGGAATGAGTCCTCACGAGAAAAGACGAATGCGGAAAAAGAGAGGCTTATCTCTAAATACTTCCTCAAAAAACATCGTCTCAGATACTACGCTAAATGGTGATATGGAAGATGGTACCGACGCATCTAAAAATGAAATTAATGAGCTTGAAAATGGTTCTATGGTGGACGACTCGGATATCAATTCTGAACCTGCGGACGCATCTGCTAAACAAAATGGATCTGTAAACGTAAATTCTGATGGTGCAGTAATTGCTACATGTAGTTCAAAGCTTTCGTTATTAGGGCATGGACCACATGGGAAGCAAGTCGTGGATTATCTGCTGAAGGAACATGGGGAAGATGGGATTCGTGAATTTTGTCAGAGATGGAGACAAGTCTTTGTTGAAGCTATCAATCCTCAGTTTTTACCGGCTGGTTGGGATGTGACACATAGTGGTAGGCGAGAGTTTGGGGACTTCAGCGTATACAATCCTGCAAATAAGGGTTCTCCTTCTTCTGCTGCCAAGGATCTGACGGTGTAG	2682	40.79	MEVKDKIKVLVTVSCVTVLASLIKMLLNRRRDRTRLKEDLSSCYLKTEDHNKCQLMFKCVLANNSYAPFKHFKFHDNSTDLHPYESEIKALLEKPQLDVEFSNGTMCDMKDTYVWVDDEVKLKQLVEVLSKERVFAVDTEQHSLRSFLGFTALIQISTRDEDYLVDTIAVHDVMGILGPVFANPNICKVFHGADNDVVWLQRDYHIYVVNLFDTAKACDVLSKPQRSLAYLLETYCAVITNKFYQREDWRQRPLPKDMIEYARMDAHYLLYIADCLVSELKHQKTENSAHLDDNKLDFVYEASRRSNAVCLQLFTKELEASPGQSAASSIISRHLNDPGSSIDNSQFQGIVRRLCCWRDFMARMHDESLKYVLSDNAIVALAEKVPLNETDISTTISQADTHLGSLNPDSTTRNPSSVVLSHLADFGFLLQGELQNPDEILQLYIKKHLGPNGSCPLSLYNYGLLSKNSIKVPKRLVSKANGYKFSKQVARKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLQRDLAKLVDEDPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLVCVDCHEKAHSFAEKYKKKVASDYGIPLFVHKVVNSSEGDGVSGGSTSVMKLGDGGVSPLELRTAAMALLRHGPRMPPQRREELTQVVRKYYGGREISDEDLENALLVGMSPHEKRRMRKKRGLSLNTSSKNIVSDTTLNGDMEDGTDASKNEINELENGSMVDDSDINSEPADASAKQNGSVNVNSDGAVIATCSSKLSLLGHGPHGKQVVDYLLKEHGEDGIREFCQRWRQVFVEAINPQFLPAGWDVTHSGRREFGDFSVYNPANKGSPSSAAKDLTV	893

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glco3g00163	893	MobiDBLite	consensus disorder prediction	737	757	-	-
	Glco3g00163	893	Pfam	HRDC domain	349	393	IPR002121	GO:0003676(InterPro)
	Glco3g00163	893	MobiDBLite	consensus disorder prediction	725	794	-	-
	Glco3g00163	893	MobiDBLite	consensus disorder prediction	878	893	-	-
	Glco3g00163	893	ProSiteProfiles	HRDC domain profile.	344	433	IPR002121	GO:0003676(InterPro)
	Glco3g00163	893	SUPERFAMILY	Ribonuclease H-like	52	301	IPR012337	-
	Glco3g00163	893	Gene3D	-	24	320	IPR036397	GO:0003676(InterPro)
	Glco3g00163	893	SUPERFAMILY	HRDC-like	344	397	IPR010997	GO:0000166(InterPro)\|GO:0044237(InterPro)
	Glco3g00163	893	MobiDBLite	consensus disorder prediction	874	893	-	-
	Glco3g00163	893	FunFam	Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain	51	320	-	-
	Glco3g00163	893	CDD	Rrp6p-like-exo	109	304	IPR049559	-
	Glco3g00163	893	MobiDBLite	consensus disorder prediction	765	794	-	-
	Glco3g00163	893	Gene3D	HRDC domain	339	439	IPR044876	-
	Glco3g00163	893	Pfam	3'-5' exonuclease	113	280	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Glco3g00163	893	PANTHER	POLYMYOSITIS-SCLERODERMA AUTOANTIGEN-RELATED	49	881	IPR045092	GO:0000175(PANTHER)\|GO:0000175(InterPro)\|GO:0000176(PANTHER)\|GO:0000467(PANTHER)\|GO:0000467(InterPro)\|GO:0003727(PANTHER)\|GO:0005730(PANTHER)\|GO:0071035(PANTHER)\|GO:0071036(PANTHER)\|GO:0071037(PANTHER)\|GO:0071038(PANTHER)\|GO:0071039(PANTHER)\|GO:0071040(PANTHER)\|GO:0071044(PANTHER)\|GO:0071051(PANTHER)
	Glco3g00163	893	SMART	35exoneu6	113	281	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Glco3g00163	K12951	cobalt/nickel-transporting P-type ATPase D [EC:7.2.2.-]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Glco	Glco-Chr3:10263046	Glco4g02050	Glco-Chr4:93612959	dispersed
	Glco	Glco-Chr3:10263046	Glco8g02918	Glco-Chr8:160731518	transposed