Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glco3g00291	ATGGCGAAAAGTTCATACATTTTCTGTGCAGCTGTTCTAATTGTCGTACTTGCTATCGCAGAAATACAGGCCGCTGGCCCAAAGCTGTGTGAAAAGGCTAGCAAGACGTATTCAGGTAAGTGTGACAACAAGAAATGTGACAAAAAGTGTATAGATTGGGAGAAAGCACAACATGGTGCTTGTCACAAGCGAGAAGGTAAGGATGCGTGTTTTTGCTACTTCGATTGTTCCAAAGCACCCCCTGGAGCTGCACCGGCGCCTCCTGGAGCAGCGCCCCCACCAGCTCCTTCCGCTGATGGTGGATCACCACCTCCTCCAGCTGATGGTGGTTCTCCTCCTGCCGATGGTGGCTCACCACCTCCTCCGTCTGCTCACTAA	378	51.59	MAKSSYIFCAAVLIVVLAIAEIQAAGPKLCEKASKTYSGKCDNKKCDKKCIDWEKAQHGACHKREGKDACFCYFDCSKAPPGAAPAPPGAAPPPAPSADGGSPPPPADGGSPPADGGSPPPPSAH	125

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glco3g00291	125	Pfam	Gamma-thionin family	28	76	-	-
	Glco3g00291	125	PANTHER	DEFENSIN-LIKE PROTEIN 1	1	76	-	GO:0006952(PANTHER)
	Glco3g00291	125	SMART	gth-4	29	76	IPR003614	GO:0006952(InterPro)
	Glco3g00291	125	MobiDBLite	consensus disorder prediction	81	125	-	-
	Glco3g00291	125	SUPERFAMILY	Scorpion toxin-like	28	76	IPR036574	-
	Glco3g00291	125	Gene3D	-	25	76	IPR036574	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Glco3g00291	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Glco	Glco-Chr3:15691636	Glco3g00291	Glco-Chr3:15699688	dispersed
	Glco	Glco-Chr3:15699688	Glco3g00293	Glco-Chr3:15704928	dispersed
	Glco	Glco-Chr3:15696943	Glco3g00291	Glco-Chr3:15699688	tandem

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glco1g02985	.	16	74	Plant Defensins gene family	AT2G02120	36.066	3.25e-07	41.2
	Glco1g03415	.	1	77	Plant Defensins gene family	AT2G02120	60.256	3.90e-32	105.0
	Glco1g03594	.	1	77	Plant Defensins gene family	AT2G02100	61.538	1.33e-31	103.0
	Glco1g03600	.	1	77	Plant Defensins gene family	AT2G02120	60.256	1.57e-29	98.2
	Glco1g03606	.	1	77	Plant Defensins gene family	AT2G02120	57.692	1.44e-30	100.0
	Glco3g00283	.	1	78	Plant Defensins gene family	AT1G19610	51.282	3.58e-26	91.7
	Glco3g00285	.	7	78	Plant Defensins gene family	AT1G19610	41.667	4.08e-15	67.0
	Glco3g00287	.	13	78	Plant Defensins gene family	AT1G19610	48.485	7.27e-18	70.9
	Glco3g00289	.	13	78	Plant Defensins gene family	AT1G19610	48.485	3.92e-18	71.6
	Glco3g00290	.	3	78	Plant Defensins gene family	AT1G19610	43.421	2.98e-17	69.3
	Glco3g00291	.	15	78	Plant Defensins gene family	AT1G19610	46.875	1.82e-17	69.7
	Glco3g00292	.	8	78	Plant Defensins gene family	AT1G19610	29.333	7.15e-06	39.7
	Glco3g00293	.	1	78	Plant Defensins gene family	AT1G19610	43.59	1.71e-18	73.6
	Glco3g00294	.	18	78	Plant Defensins gene family	AT1G19610	52.459	1.18e-16	68.2
	Glco3g00295	.	12	78	Plant Defensins gene family	AT1G19610	58.824	2.51e-24	87.0
	Glco3g04232	.	72	122	Plant Defensins gene family	AT5G38330	48.077	1.82e-09	48.9
	Glco7g00121	.	2	73	Plant Defensins gene family	AT5G63660	60.274	7.17e-26	89.0
	Glco10000229.1g00008	.	3	78	Plant Defensins gene family	AT1G19610	50.0	1.51e-23	83.6