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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g00358 ATGGCTTCTTTTACAAATAGTTGCAATTTCATCTTCCATGTTCTATTGCTTATACAGTTATGCAGTTCTCGGGGTATCTACGACAGACTGAAAAACGATCACAACGAAGAAAATCATATAGATTTATTTGGAAATAATGAACATGGTGATCTGGATCCTGCTCTGAATGTGTTCTTCCATGTAAAAGACTTGTACTCGGGCAAAAAGATGTCAATTTATTTCGCGGGTAGTGATCCTTTAACAACTCCTCGGCTACTAGCACGAGAACAAGCTGATTTGATACCATTCTCCTCATCGAAACTCCCATACCTTCTTGACTTTATCTCCATACCCGAGGGTTCGCCTCAAGCCATAGCTATGGAGCAAACACTTAAACAATGTGAGCTTGAACCTGTACATAACGAGTACAGGTTTTGCGCTAGCTCCTTAGAGTCCATGCTGGACTTAACACGAGGCGTGTTAGGTACAGACAAAATGAAGACTTTGACAACCCAAATTCATAATTTGACAGATCCTAGTTTCACCCTTTTGCAAGGGTATACCTTTTTGGAAGAGCCTTTGGAAATTCATGTTCCTGATATGGTGGCTTGTCATACCATGGCTTATCCTTATACAGTTTACTATTGTCATGGTCAGAAGGGATATAATAGGGTTTTCCGGATTCCTTTAGGAGGTGAGAACGGAAATAGAATCGATGCTATTGCTGTTTGCCATATGGACACATCTATGTGGGATCAAGATCATGTGGCGTTTCGTGTGCTTGGAGGACACCCTGGTAGCTCGCCAGTGTGCCATTTCCTCCCTGCCGATAATATTGTCTGGATACCATCACCGTAG 837 42.05 MASFTNSCNFIFHVLLLIQLCSSRGIYDRLKNDHNEENHIDLFGNNEHGDLDPALNVFFHVKDLYSGKKMSIYFAGSDPLTTPRLLAREQADLIPFSSSKLPYLLDFISIPEGSPQAIAMEQTLKQCELEPVHNEYRFCASSLESMLDLTRGVLGTDKMKTLTTQIHNLTDPSFTLLQGYTFLEEPLEIHVPDMVACHTMAYPYTVYYCHGQKGYNRVFRIPLGGENGNRIDAIAVCHMDTSMWDQDHVAFRVLGGHPGSSPVCHFLPADNIVWIPSP 278
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g00358 278 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 41 277 IPR044816 -
Glco3g00358 278 SMART BURP-2 56 277 IPR004873 -
Glco3g00358 278 Pfam BURP domain 57 275 IPR004873 -
Glco3g00358 278 ProSiteProfiles BURP domain profile. 58 277 IPR004873 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g00358 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr3:2214611 Glco3g00358 Glco-Chr3:19602030 dispersed
Glco Glco-Chr3:19602030 Glco7g06478 Glco-Chr7:563621931 dispersed
Glco Glco-Chr3:19361685 Glco3g00358 Glco-Chr3:19602030 tandem