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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g00391 ATGTCAATCCTAGGTTCTAATTTCCCTTCCGAGGTTGGTCTGAAATTGCTACTTTCCCCGGTTGGTTCCAACATTGTCCTAAAAACAGCATGCTGTTCTGTGGGAGTTATTTTGCCTGTTTATTCTACTTTTAAAGCGATCGAGACGAATAACAGAACTGATCAACAAAAGATGCTTTTATACTGGGCAGCATATGGGACTTTTAGTATTGCAGAAACATTTGCAGACAAAGTTATATCATGGGTTCCATTTTACCATCATATGAAGTTTGCGTTTCTTGTTTGGCTTCAGCTTCCCACCACTAACGGTGCTAAACAGATATACATGAGTCATATACGTCCTTTTCTCATGAGGCATCAAGGCAACCTCGATCATATTGTGGCCTTTTTGTACACTGAAACGGGTAAATTTGTTAGCGCTCACGAAAGCGAATTTTTGTTCGTTAAGGCAGTCGTGACTAAGATTCTGATATCAGCAAAGCATTTTGTCACCGATAGCAGTCAACCCATCCCACCGGTCCCACCACCAGAAGGAAGAGCAAGAACAATCACAAACGTAAATGAACAAGCAGAGAGCATTAACTCTGAAGAAGAGGAGGATGATGGTTTTGTAACTGTACCTGCAACTTGA 630 41.27 MSILGSNFPSEVGLKLLLSPVGSNIVLKTACCSVGVILPVYSTFKAIETNNRTDQQKMLLYWAAYGTFSIAETFADKVISWVPFYHHMKFAFLVWLQLPTTNGAKQIYMSHIRPFLMRHQGNLDHIVAFLYTETGKFVSAHESEFLFVKAVVTKILISAKHFVTDSSQPIPPVPPPEGRARTITNVNEQAESINSEEEEDDGFVTVPAT 209
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g00391 209 PANTHER HVA22-LIKE PROTEINS 35 132 IPR004345 -
Glco3g00391 209 Pfam TB2-DP1, HVA22 family 39 115 IPR004345 -
Glco3g00391 209 MobiDBLite consensus disorder prediction 190 209 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g00391 K17279 receptor expression-enhancing protein 5/6
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Event-related genes

Select Gene_1 Gene_2 Event_name
99408 Glco3g00391 Glco7g06468
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr3:21083517 Glco7g06468 Glco-Chr7:563266302 dispersed
Glco Glco-Chr3:21083517 Glco9g00979 Glco-Chr9:39951482 transposed