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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g00414 ATGAAATACACTGAAATTTCCCATTTCAGCCACCCTCAACACCGCCTCAAACCGGGCTACACCGAGATCCCATTCAAGTGTGATGGATGCAAAGAAGTCGGAATAGGGTCCAATTACAAATGTACAACATGCAACTACGACTTACATGTCCATTGCGCCCTACCATCCCCTTCCATCATCCACCCTTTCTACACCAAATGTTCCTTCCAATTCATGGCCCGTCCACCAGGGCCCATAGCCCGTTACTGCAACGCATGCGAGAAAGTTGTGTCAGGATTTGTTTACCACTGCAAGTTATGTGGATTCGACCTCCACCCATGTTGTGCCAAGCTTCCAACTATGTTGGACGACGGTGAAGTGGAGTTGTATTTGTATAGAAAAGTAGGTTCTTCCTGCCATAGATGTGGCAGGAAAGGACGGAGCTGGAGTTACAGGTCCACGTGCAAGAAGTACAACTTGCACGTGGCCTGTGTGAAAGAAATGTTGGTGGAGAGTTGGCATGACATATACTTTGGTAGGAGTGGGGTGAGTGGTAGTAATTCAAGTGGTGATTTTTATGGACAAAATAGAAAAATTGAGACAAGAATCCCAAGCTTAAGAGGTACATTGGAAAGCTATCACCATAATCATCAAAGCAAAGGGAAAGTGAAGAAATGCTGCGAGATGGCAGGGTTGGCAATGCAGTTTGTCATATCAGCTGTTCTTGGCGATCCAACCACTCTGATTGCTGGTGTTGTCGGCACGTTAATGTCTAAATAG 759 45.85 MKYTEISHFSHPQHRLKPGYTEIPFKCDGCKEVGIGSNYKCTTCNYDLHVHCALPSPSIIHPFYTKCSFQFMARPPGPIARYCNACEKVVSGFVYHCKLCGFDLHPCCAKLPTMLDDGEVELYLYRKVGSSCHRCGRKGRSWSYRSTCKKYNLHVACVKEMLVESWHDIYFGRSGVSGSNSSGDFYGQNRKIETRIPSLRGTLESYHHNHQSKGKVKKCCEMAGLAMQFVISAVLGDPTTLIAGVVGTLMSK 252
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g00414 252 Gene3D - 18 65 IPR043145 -
Glco3g00414 252 ProSiteProfiles Zinc finger phorbol-ester-DAG-type profile. 13 67 IPR002219 -
Glco3g00414 252 Pfam C1 domain 72 109 IPR004146 -
Glco3g00414 252 Pfam C1 domain 9 53 IPR004146 -
Glco3g00414 252 PANTHER CYSTEINE-HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 2 250 - -
Glco3g00414 252 SUPERFAMILY Cysteine-rich domain 36 114 IPR046349 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g00414 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr3:22404371 Glco9g03453 Glco-Chr9:459703044 dispersed