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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g00433 ATGATGATGATAAGGTCAGTAGGGTTAGTTAAACCTGCAATGATATGTTGTACATCACGTAGTAGTAGTGGTAATGAAGCGTATATACCGAAACTGGAACCGTTTAGTCGAAGTAAGATTGATCGGATGGTTAGAGATCCGCCCTTGATTCAGAAATCTGAAAATGATTTAGCAGATTATTGTTCCACGTTGGAAGGAGATAGATCTTACAGCTGTTGGAGAGCTTATTTTGAGCTTAAGGATCTCGAGAAAGAAGCTCCAAAGGAGGAGGTAGAGAGGATGATAATAGAATCCGGAGGTGTGAAATCATTGATTGGATGTTTACACGGAATAACCGAAATTCACAAAGCAAAAAAGCAGTCAGAAAATGAGAACGGATCAGAAGCAAGTCATTTGAATTCGATGGAGAATGTGACCACAGATGGAGGTAGAAGGAGAGAGTGTCCGGTGCCAGATGGATTACCCAAGAGCCGAGAAGAGATGGAGGAAGAAGAGAATGGGAAAATGCCGGATTCGCCATTTACTAGATTGCTTCGTTCCAAAGGGAAGTTCCCTGCTTGGTACTCCCCTGCTCCTGATCATGAAACCGATTAG 594 42.59 MMMIRSVGLVKPAMICCTSRSSSGNEAYIPKLEPFSRSKIDRMVRDPPLIQKSENDLADYCSTLEGDRSYSCWRAYFELKDLEKEAPKEEVERMIIESGGVKSLIGCLHGITEIHKAKKQSENENGSEASHLNSMENVTTDGGRRRECPVPDGLPKSREEMEEEENGKMPDSPFTRLLRSKGKFPAWYSPAPDHETD 197
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g00433 197 MobiDBLite consensus disorder prediction 140 170 - -
Glco3g00433 197 MobiDBLite consensus disorder prediction 118 176 - -
Glco3g00433 197 PANTHER CCG-BINDING PROTEIN 1 15 197 IPR037502 GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0010183(InterPro)|GO:0036033(InterPro)|GO:0036033(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g00433 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr3:23861823 Glco9g03443 Glco-Chr9:458523276 dispersed