AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g00440 ATGGCACCTGCAAAACACACGATCTCACAACAAGCATTCGATGAAATGGTTAACGAAAACATAAACGATCTAGGAATGGACCCAGCAGAAGCCTTAACAGACGCCATCGAAACCTTAACTTTACAAAACGTTGATCTTTCTGGTATCATCACCTCCACTCTCCCAGGTCAAGCCCACCCAGTCATCCACTCACTTGACCAGATCAAACGTACCCATGATTTGAATGACGAGTTGGGGTTGAGTCAAAAGATTGATGAGCTGGTTGGGTTGGGGAATGATAATGGGAATGGGAATGGGAATGTGGCGGTTGCGGGGCGAAACGGGGTGGTGGAGCTGATGTGTGAGGTTTGTGGGAGGAGTGAGGGGGTGAGGGTGCGAGTTTCGGCGTTGAACGCGTTGGCTTTGTTTATTTGTGATATTCAAAGTACGGAAATATTTCGGCAAAAAGGAGGTCCGAAAATGGTTGTCGGTATTTTGAATGATGGAATTGAAAATGTGAATGTATTGAATAGTGGTTTTGCAGTTGTTGCTGCGGCTGCAACTGGTAATGAAGTTATTAAGGAGTCTTTTGTTGAGTTACATATAGCTGAGTTAATGGTTAATGTGATGAGGAAGCATGGTAAAGGGAGTATCCCGAGTTTGTATGATGCTATTCGAGTGCTTTTGGCAGCTGATGATAACCGAGTAGTGGCTTCACAAGTTTTTGGCTATGCTCGACAATTTGCGAAAATTGGAATTGCAGAAGCTCTTGTGGAGTCACTTAAGGATGGGCTTAGCTCGCCAAGTCTGGTATCTGCCACTATTGCACTGAAGGCCATTGCAGTGAATGATGACATATGCAGATCAGTTGCTGAAAATGGTGGTATAGATTCATTGCTTGCTTGTATTGATGACGCCAGTGTACAGGGGAACAACACTGTGGCTAAAGCTTGCTGCTCTTTATTATCGAAGTTGGCAGGAAGTGATTTTAATAAGAGTGCTATTGTTGAAAGGGGAGGGTTGAATAGGCTCATAACACTTTCTAGCAGACTTGCTGACGATCCTTCTGTCATCCAAGAGGTAATGACTATCATATGTACACTCTGCCTGCGATCGCCTGGAAATGCAACCTTAGCCATAGAAGCAGGAGCAGGAGATCTTGCAATCCAATCTATGCAGAAGTTCCCTGAGGCATATCAGCTGCAGAAGAACTCTTGTCTCATGATCCGTAATCTTGTTGCCAGGAATCCAGAGAACAGGACTCTTTTGTTAGGTAATGGTATTGAGAAGATCATACGTAAAGCCAAAGAAAACCACAAAAGCTGCAAAGACGCAGCTACCGCTGCTCTTAGAGACTTGGGGCTTGATAACTACAACTCGTAA 1362 44.42 MAPAKHTISQQAFDEMVNENINDLGMDPAEALTDAIETLTLQNVDLSGIITSTLPGQAHPVIHSLDQIKRTHDLNDELGLSQKIDELVGLGNDNGNGNGNVAVAGRNGVVELMCEVCGRSEGVRVRVSALNALALFICDIQSTEIFRQKGGPKMVVGILNDGIENVNVLNSGFAVVAAAATGNEVIKESFVELHIAELMVNVMRKHGKGSIPSLYDAIRVLLAADDNRVVASQVFGYARQFAKIGIAEALVESLKDGLSSPSLVSATIALKAIAVNDDICRSVAENGGIDSLLACIDDASVQGNNTVAKACCSLLSKLAGSDFNKSAIVERGGLNRLITLSSRLADDPSVIQEVMTIICTLCLRSPGNATLAIEAGAGDLAIQSMQKFPEAYQLQKNSCLMIRNLVARNPENRTLLLGNGIEKIIRKAKENHKSCKDAATAALRDLGLDNYNS 453
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g00440 453 SMART arm-5 276 320 IPR000225 GO:0005515(InterPro)
Glco3g00440 453 SMART arm-5 365 407 IPR000225 GO:0005515(InterPro)
Glco3g00440 453 SMART arm-5 321 363 IPR000225 GO:0005515(InterPro)
Glco3g00440 453 SUPERFAMILY ARM repeat 119 447 IPR016024 -
Glco3g00440 453 Gene3D - 87 453 IPR011989 -
Glco3g00440 453 PANTHER UNCHARACTERIZED 6 449 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g00440 K24166 armadillo repeat-containing protein 6