Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glco3g00593	ATGGCTCGGTCAATAGTTTTTCATGTTGCGTTATTAGTGATGTTTGCCTTGGTGACAACTAGTGAACAGAAAACCCCGCCGGGAATTGCTAACAACCCTAGCCATGCAACTTGTAAAGACCCGACATACAAAGAATGTCATAACTTGGTTCATGTTTGTCCTAAGTTTTGTCCCAATGGATGCACCGTTCATTGTCAATCGTGCAAGCCTATTTGTATCGGATCCACTACACCTTCGGTACCAGAATTAGAACCTCCACCACCTCCAACGACCCCCACGCCACCACCACCTGCACCTCCGACAACCACACCTTCACCTCCACCAACATACCCGCCGCCTACAACAACTCCTACACCACCAACACCTACACCTCCTACTGCCACACCTTCACCTCCACCACCAATATACTCTCCGCCACCAACACCAACTCCATCCCCACCTCCTACATCGTATCCTACTCCACCTTCCAAACCAAAGAAGGTAAAGTGCAAAAACAAGAACTATCCCCAATGTTACACATCTGAGCATGTATGTCCTGCTTCTTGTCCCGGTCAATGTGAGGTTGATTGTGTCTCTTGCAAGCCAGTCTGTAAATGTGATATGCCTGGAGCTGTGTGTCAAGATCCTCGTTTTATTGGTGCTGACGGAGTCACTTTCTACTTCCATGGAAAGAAGGATAAAGATTTCTGCCTTGTTACCGATACTAACCTTCACATCAATGGCCATTTCATTGGCAAGAGGAACAAAAACATGGGCAGAGACTTTACATGGGTTCAATCTATTGCGGTTCTCTTTGACAATCACAAACTACAAATCGGCGCTCAAAAGACTTCCACTTGGGATGACGCTATTGACCATATATCCATTACATATGATGGGGAAAGCATTATTCTCCCCGAAACTGAAGGCGCAAAATGGGAATCTTCAAAAACATCAATCACTAGGATTCAAGACACGAACGATGTCATTGTTGAAGTTGAAAACCTTTTCAAGATCACTGCCAAGGTGGTTCCAATAACAGAAGAAGACTCAACAGTTCATAACTATGGTATTACCGATGATGATTGCTTTGCTCATCTTGATCTGAAGTTCAAGTTCTTCTCCTTAAGTAATGAAGTGGATGGAGTTTTGGGACAGACATATAGGAACGACTATGTGAACAAGGTGAAAATGGGAGTGCTAATGCCTGTTATGGGCGGAGGTAGTAAGTTCATGAGTACAAATTCATTCGCAAATGATTGCTCGGTGTCTAAGTTTAAGGCAAACAGCCATTCTTCCGGTTCGTCTTTGAGTTTGGAATTGCCAAGCTTGATGTGCCAAAGTGGTATCAACGGACGAGGTGTCGTGTGCAAGAGATAG	1359	44.59	MARSIVFHVALLVMFALVTTSEQKTPPGIANNPSHATCKDPTYKECHNLVHVCPKFCPNGCTVHCQSCKPICIGSTTPSVPELEPPPPPTTPTPPPPAPPTTTPSPPPTYPPPTTTPTPPTPTPPTATPSPPPPIYSPPPTPTPSPPPTSYPTPPSKPKKVKCKNKNYPQCYTSEHVCPASCPGQCEVDCVSCKPVCKCDMPGAVCQDPRFIGADGVTFYFHGKKDKDFCLVTDTNLHINGHFIGKRNKNMGRDFTWVQSIAVLFDNHKLQIGAQKTSTWDDAIDHISITYDGESIILPETEGAKWESSKTSITRIQDTNDVIVEVENLFKITAKVVPITEEDSTVHNYGITDDDCFAHLDLKFKFFSLSNEVDGVLGQTYRNDYVNKVKMGVLMPVMGGGSKFMSTNSFANDCSVSKFKANSHSSGSSLSLELPSLMCQSGINGRGVVCKR	452

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glco3g00593	452	PRINTS	Proline rich extensin signature	76	97	-	-
	Glco3g00593	452	PRINTS	Proline rich extensin signature	104	120	-	-
	Glco3g00593	452	PRINTS	Proline rich extensin signature	121	138	-	-
	Glco3g00593	452	PRINTS	Proline rich extensin signature	25	37	-	-
	Glco3g00593	452	Pfam	Root cap	363	419	IPR009646	-
	Glco3g00593	452	PANTHER	ROOT CAP DOMAIN-CONTAINING PROTEIN	139	452	-	-
	Glco3g00593	452	MobiDBLite	consensus disorder prediction	80	155	-	-
	Glco3g00593	452	MobiDBLite	consensus disorder prediction	80	163	-	-
	Glco3g00593	452	SUPERFAMILY	beta-sandwich domain of Sec23-24	85	153	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Glco3g00593	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Glco	Glco-Chr3:32483825	Glco3g00593	Glco-Chr3:32962578	dispersed
	Glco	Glco-Chr3:32534291	Glco3g00593	Glco-Chr3:32962578	dispersed
	Glco	Glco-Chr3:32869915	Glco3g00593	Glco-Chr3:32962578	dispersed
	Glco	Glco-Chr3:32924802	Glco3g00593	Glco-Chr3:32962578	dispersed
	Glco	Glco-Chr3:32962578	Glco3g00595	Glco-Chr3:33014647	dispersed
	Glco	Glco-Chr3:32962578	Glco3g00594	Glco-Chr3:32982146	tandem