AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g00793 ATGAAGACATGTGACAGCGATCATCGTTTTTTTTATCCATTAACAAGTTTCCAGATCGGAGATTTGCAGTCTTATCTTTCCGATCTTACGCTTTATTTAGCGCCTGATACCAAGTCATTTTATGTATTGGTGGATAATAGGCCATGGTTGGAGGATTTGCCATCGCGCCCTGCGCGTCTTTGGCAGCTAATGGTTACTAAGTCGAGGATGTCTCCTTTTGCCAACAGCAGAGGGCGAAAGGGGAAGAACGAGACTAGGGACGAGAACAAGGACAATTCGACAGGTGGTTTAAGCAAGTCTCAAAATATCAAAAAATGGTTCTCCGTAGTTGATGCTGCAACATTGTCAAAAAAGAGGGCGTTGTTACCTGTAAAGAAACTTAGGAGTTCGTTGCTAGCGAATAGCAAATTGCATAGAACTTTGTTTGGGTTTATTGTGTTTCAAGTGGCGTGGAAAGATGTTCGGGGTATGAATTACTTGAATGAGCTTCAGACGGATACATCTCTTGCTGTAGAGGCTAAATATATGAAGAGATGGGAATTTGATAGCATAGCTCAAGCAGAAAAATGCATAAGCACATGGTTTCCGGGTACATCACACGAACGACGTCTTTTGAAAGAGCACCTCGACTCTATGTTAGGAGACGTCTTCCATGATGCCCCTGAAGAATTTCCAGACCACCAAAATACAAATCATGATGTAAATAACTCGATTACTTTTGTACAGAGGGAGAATGAATCTCCCTGCACACCTCGTTGCAATCTTGGGGAAATGCTAGAAACTTTAGTAGACCAAACAGATAGTAAAACAAGTACAGTACATACACCTCCACCTGCTGGACCCTATAAAAGAAGAAAACTAATGAGTCCCACATCACTTGATATCAAGCCCAATTTTGTTGCCGAAGTAGCTCATGGTGGGGCCTTTTGCGCATCAACTACCTCCTCTTATGCAAGTGATTGTGATGAAACAGCTGAAGCTACCGAATACAGGGATGTGTTGCTTTTATTCCGATTCAATAATCATGACCTACCTTTCGAGTTACAAAAGATAATAGTATCTGATCTGCGATTACTTACTTTATTAGAAGCTGGACTTGCGTCATGGGTGATTTTCTGTCAGTCTTATCCTGTATTCTGTCATATTTATCGTCCATGGATGTCCCTTCTGGCAAGAGTTTTATATGTGATAATTTCCATTGTAACGGTTGTCATTGGTTTCTATGATCTGTACAAAAACGTCCCCGTTCTTAAAGCAACTGCATCACGGTTATGTGGGCCACTTTTTGATTGGATAGAAACATGGGAGATGGTATCGAGAATCAAGTATTTGGGAACTATGTTGTTTTTGCATAATTCTGAGAAGGCTGTAATGTGGTTCTTGATGATGACACGCACTGTTCGATCATTTGTTTCGATTATCACTCAGCCGTTGGCTGGGCCATTTGTTGAATTTTTGGAGGTTCTTTTTCCGGTCTGGAACTTGTTAGTCGAAACGGGACAGTATTTGTGCTCGTTCGTTTGGCTTCTAATGGAAACATCATGGGATGTAGTTGAGAATCTGGTTGAAGCCGTCCTGCTTCCTGTCTGGTTCCTCTTGTCATTTGTTTGGATGATTGTAAAAAGTGTTATGTACCCGATAATTTGGTGCCTCTGGGGGATACTCTATGCTCCGATCAGTCTCATACTTGCTTTATCCAATTTTGTGGGATATGTTTATAATGAAATATATGATTTGGCTAGAGACATATGGCTGTTTATGAGTAGTCTCTTCAAGTTAGCTTCAAGTGCTGAGGCGACAGTGCATACATACGAGGTTTCTATTTGGCGGTCTCTTTGGAATGACCTCTTCTCACAGATTTTTCGTGCTGTCCGGAGTATTTTACATGGGTTTGTTGCATTCTTTACAGCTTGTAATAGACATCGCTTAAGCATATATAATCATACACAGGAGCTCATTCGGACAGTCAATCAGCCATCCCAGAAGAGGTCACAGTCCTTGAATCCTAGCCATGAATCACAACCATTGAAATCTAGCCGTGGATCACAGAGATCTGCAAGTCAGATACGGGAAGAAGTCGGGGAACAAAAGCTGCGGTCCAGAAGAAGCTCAAAGATGTAG 2121 41.68 MKTCDSDHRFFYPLTSFQIGDLQSYLSDLTLYLAPDTKSFYVLVDNRPWLEDLPSRPARLWQLMVTKSRMSPFANSRGRKGKNETRDENKDNSTGGLSKSQNIKKWFSVVDAATLSKKRALLPVKKLRSSLLANSKLHRTLFGFIVFQVAWKDVRGMNYLNELQTDTSLAVEAKYMKRWEFDSIAQAEKCISTWFPGTSHERRLLKEHLDSMLGDVFHDAPEEFPDHQNTNHDVNNSITFVQRENESPCTPRCNLGEMLETLVDQTDSKTSTVHTPPPAGPYKRRKLMSPTSLDIKPNFVAEVAHGGAFCASTTSSYASDCDETAEATEYRDVLLLFRFNNHDLPFELQKIIVSDLRLLTLLEAGLASWVIFCQSYPVFCHIYRPWMSLLARVLYVIISIVTVVIGFYDLYKNVPVLKATASRLCGPLFDWIETWEMVSRIKYLGTMLFLHNSEKAVMWFLMMTRTVRSFVSIITQPLAGPFVEFLEVLFPVWNLLVETGQYLCSFVWLLMETSWDVVENLVEAVLLPVWFLLSFVWMIVKSVMYPIIWCLWGILYAPISLILALSNFVGYVYNEIYDLARDIWLFMSSLFKLASSAEATVHTYEVSIWRSLWNDLFSQIFRAVRSILHGFVAFFTACNRHRLSIYNHTQELIRTVNQPSQKRSQSLNPSHESQPLKSSRGSQRSASQIREEVGEQKLRSRRSSKM 706
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g00793 706 PANTHER OS05G0597400 PROTEIN 1 700 - -
Glco3g00793 706 MobiDBLite consensus disorder prediction 79 93 - -
Glco3g00793 706 MobiDBLite consensus disorder prediction 265 286 - -
Glco3g00793 706 MobiDBLite consensus disorder prediction 658 689 - -
Glco3g00793 706 MobiDBLite consensus disorder prediction 72 97 - -
Glco3g00793 706 MobiDBLite consensus disorder prediction 690 706 - -
Glco3g00793 706 MobiDBLite consensus disorder prediction 658 706 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g00793 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr3:46736645 Glco9g03758 Glco-Chr9:482351648 dispersed