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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g00873 ATGGCTATAACTTTAAGCTATACTCTTGTTCTACTTTCTTACCTTCTTGCGTCTCATTTCAACGCTATATCATCTGCACGATCGTGCTCAGACCACAGATTCACGTCTAGACGACTTTATACCTCTTGTCAAGATCTTCCTCATTTATCTGCCCATCTCCATTGGACTTACAACTCATCAATGGGCATAGCTAAGATCGCGTACCGAGCCAAACAAGGGTCTCGTGGTTGGGTGGCTTGGGCTATTAATCCAAACCAGATAGGTATGGTTGGGTCAGAAGCAATTGTGGCGTTCCATAACAGTAATGGGAGTATAACGGTTTATCCAACATTGATAACAAGTTACAGTCCGTCAATGCTTCCTGGAGATCTTAGCTTTCCGGTTTCGGGTCTTTCAGCTGACTTTGTGAATGGTGAGATAACTATATATGCGACTGTGGGCCCGTTCGCAGGCGGATCCCTTGTGAATCAAGTATGGCAAGCGGGGAATTTGGTTTTGAATGATGTACCGCAAATGCACGATGTTTCTCAGCAGAATCTGCAATCAACAGGGGAACTTGATTTCTTGTCTACGGAGTAG 579 44.56 MAITLSYTLVLLSYLLASHFNAISSARSCSDHRFTSRRLYTSCQDLPHLSAHLHWTYNSSMGIAKIAYRAKQGSRGWVAWAINPNQIGMVGSEAIVAFHNSNGSITVYPTLITSYSPSMLPGDLSFPVSGLSADFVNGEITIYATVGPFAGGSLVNQVWQAGNLVLNDVPQMHDVSQQNLQSTGELDFLSTE 192
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g00873 192 CDD DOMON-CIL1-like 40 190 IPR045265 -
Glco3g00873 192 ProSiteProfiles DOMON domain profile. 49 162 IPR005018 -
Glco3g00873 192 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 10 191 - -
Glco3g00873 192 Pfam Protein of unknown function (DUF568) 89 188 IPR045265 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g00873 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
99451 Glco3g00873 Glco9g03679
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr3:50106167 Glco9g03679 Glco-Chr9:477596938 dispersed
Glco Glco-Chr3:50106167 Glco4g06282 Glco-Chr4:582261018 transposed