AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g00920 ATGTCTAACAGAAGCTATATTGATAGAGCTATGACTAGTTATAAGAAACCCAGGATACGAGATGGGGCGGTTCGTAGGTTTCTTTTCGTAGTTTCGTTAACTTTAGCTGGGGTGTTTTTGTTGTGTTTTCTAGTTGGGATGAATTCGAGTAGTGGTAGCGAGTTAATGGGGGAAGAGAATGAGGTTCAGATTGATATTAGTGAGATTAGTTTTAATGTTTCGGATTTAGTTGGTATTGGTAGTGTTAAGTTGCCTAAGCATAACTATTTGTCGAAAATGTTGGAGGGTAAGAATCAGTTGCCACCGAGAAACGTGGATTTGTATCCGAATTTGGCGAAAGGTAGGATAGTTATTGTTCTTTATGTGCATAATCGTCCGCAGTATCTTAAATTAGTTGTGGATAGTTTATCACGTGTGTCGGGGATTAATGAGACTTTGTTGATTGTAAGTCACGATGGATACTTTGAAGCAATGAATAAGATTGTGGAAGGTATTAGGTTTTGTCAAGTGAAGCAAGTATTTGCGCCTTTTTCTCCTCATATATTTCCTAATGGTTTTCCTGGTGTGTCGCCTAATGATTGTAAAGATAAAGACGACCCGGTTGAGAAAAACTGTGAAGGGAGTACTGATCAGTATGGGAATCATCGGTCACCGAAGATTGTGTCGTTGAAGCATCATTGGTGGTGGATGATGAACACGGTATGGGATGGGCTTAAGGAAACCATTGGTCATTCGGGTGATATTCTTTTTATTGAAGAAGATCACTTCATTTTCCCAAACGCGTATCAGAATTTAAAGCTATTAACGGAGTTGAAACCTACCAAATGTCCTGATTGTTATGCGGTGAATCTTGCTCCAAGTAACGTGAAGTCTAGAGGTGAAGGTTGGAATACTTTGATAGCTGAAAGAATGGGTAACATCGGGTATACTTTTAATAGAACGGTATGGAGGAAAATTCATAGAAAAGCTAAAGAGTTTTGTTTCTTTGATGATTATAATTGGGATATAACAATGTGGTCGACGGTTTATCCTTCATTTGGTGGTCCAGTTTACTCATTGCGAGGACCAAGGGCTAGTGCGGTTCATTTTGGGAAATGTGGGTTGCATCAAGGTCAGGGTGAAAACGCTGCTTGTGTTGATAATGGTGTGGTGAATATTGACACTGAAGAGATTGATAAGGTTGCAAACATTCAACGTGACTGGGGAGTACATGTGTTTAGTAATCAAGAAGGGTATCAAGCTGGATTTAGAGGTTGGGGTGGGTGGGGAGATAAAAGAGACCATCAATTGTGCTTGGATTTTGCTAAAATGTATCATGTGAGGAACAAAGCGTCATGA 1338 39.69 MSNRSYIDRAMTSYKKPRIRDGAVRRFLFVVSLTLAGVFLLCFLVGMNSSSGSELMGEENEVQIDISEISFNVSDLVGIGSVKLPKHNYLSKMLEGKNQLPPRNVDLYPNLAKGRIVIVLYVHNRPQYLKLVVDSLSRVSGINETLLIVSHDGYFEAMNKIVEGIRFCQVKQVFAPFSPHIFPNGFPGVSPNDCKDKDDPVEKNCEGSTDQYGNHRSPKIVSLKHHWWWMMNTVWDGLKETIGHSGDILFIEEDHFIFPNAYQNLKLLTELKPTKCPDCYAVNLAPSNVKSRGEGWNTLIAERMGNIGYTFNRTVWRKIHRKAKEFCFFDDYNWDITMWSTVYPSFGGPVYSLRGPRASAVHFGKCGLHQGQGENAACVDNGVVNIDTEEIDKVANIQRDWGVHVFSNQEGYQAGFRGWGGWGDKRDHQLCLDFAKMYHVRNKAS 445
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g00920 445 PANTHER BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE II 24 440 IPR007754 GO:0000139(PANTHER)|GO:0005795(InterPro)|GO:0006487(PANTHER)|GO:0008455(InterPro)|GO:0008455(PANTHER)|GO:0009312(InterPro)|GO:0016020(InterPro)
Glco3g00920 445 SUPERFAMILY Nucleotide-diphospho-sugar transferases 116 439 IPR029044 -
Glco3g00920 445 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 115 375 IPR029044 -
Glco3g00920 445 Pfam N-acetylglucosaminyltransferase II (MGAT2) 103 431 IPR007754 GO:0005795(InterPro)|GO:0008455(InterPro)|GO:0009312(InterPro)|GO:0016020(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g00920 K00736 alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.143]