Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glco3g00928 | ATGGCGGCAATACTAGCTTCCAACAGCTGCTATTGCCGTGATGTGCAATTCGTGAATCAAGGAAGAACAACAGATAGTCTAAGCTTCTCGAGATCTGTATCTAACCAAAAATTAGACAACCAACATGAATGTAGTTTACCCAAAAGTCAAAGGTTCCCCAAGTTTCATGTCAAGATGCAGCAGACAGAATCACCCATGAAATATGGCACCAATGGCCGACCTGCAAATGGCCAACCTGTAAAATTGGGTGCTAATGGTAAACCAGTGAATTTGGGTGCTAATGGACAACCCGTGAAATTAGGTAGCAAAGGTCAACCGATCACAATGGTTTCAACCAGTGATGTTGTGAATAACAAACCAACCGTAGGATTAGTGAACGGGTCGGCAAAAGCTGTTAATGGAACAAGTCTTGTTAGGAGAGAGACCACACCGCCGCTAGTTAAGTCTGTAAAAGTCAGAGAATCCACAGGCTTTCCGCCTTCTGAGGAACTGAGGGTCTTGCCGTCAGATGAAAGTTTCAGTTGGGCGAATGAAAATTACAATTCGGTACAAAGATCAATAGATGTGTGGTCTTTTGTTCTTTCTTTACGTGTTCGTGTTTTATTAGACAATGCTAAGTGGGCGTATCCTGGAGGCTTCACAGAAGACAAGCAGAAAGGCAGAAGACGAAACACAGCCGCATGGTTAAGAGAGCGTGTACTTCAACTTGGCCCAACTTTTATTAAACTTGGGCAGTTATCTTCAACAAGGTCAGATCTATTTCCACGTGAGTTTGTAGACGAGCTTGCGAAATTACAGGATAGAGTACCGGCATTCTCACCAGAAAAAGCGAAGGGTTTCATTGAAAAAGAATTGGGTGCTCCGGTTAATATAATCTTTAAGGAGTTTGAAGAACGACCAATTGCAGCTGCTAGTCTTGGTCAGGTACATCGTGCAATCTTACATAATGGAGAGAAAGTAGTTGTTAAAGTTCAAAGACCTGGTCTGAAGAAACTTTTTGACATCGATTTACGGAATCTAAAGCTAGTCGCAGAGTATTTTCAAAGAAGTGAAACTCTTGGTGGCCCAACAAGGGACTGGATGGGCATCTATGATGAATGTGCAAAGATCTTGTACCAGGAGATTGATTATATAAATGAAGGGAAAAATGCTGATAGATTTCGTCGAGATTTTCGTAATATAAAGTGGGTCCGAGTGCCTCAAGTATTCTGGGATTACACTGCAACGAAGGTGCTGACTTTGGAGTATGTTCCAGGCATTAAGATCAACAATGTAGATGCTATAAAAGACAGGAGTTACAGTCGATCCCGGATCTCTTCACGCGCCATTGAATCATACTTGATTCAGATCCTGAAAACAGGTTTCTTTCATGCTGATCCTCATCCCGGAAATCTTGCTATTGACTTGGATGAATCTCTAATCTACTACGATTTTGGTATGATGGGGGAGATTAAGTCCTTCACCAGAGAAAGATTGATGGATCTCTTTTATGCGGTTTATGAAAAAGATGCAAAAAAGGTTATGAACAGTTTGGTAAGTCTTGAAGCGCTTCAACCTACCGGAGACATGTCACCGGTTAGGCGATCTGTTCAGTTCTTTTTGGACAATTTGCTGAATCAATCACCAGACCAGGAGACAACTTTGGCTGCCATAGGCGAGGATCTATTTTCTATAGCAACAGATCAGCCTTTTCGGTTCCCATCGACGTTCACGTTTGTAATTAGGGCGTTTTCTACTCTTGAAGGAATTGGCTACTCACTTGACCCAGATTTTTCATTTGTTAAGATTGCTGCACCTTACGCACAGGAACTGCTTGATCTCAAAGAACAGCGGCCAAGTGGAACACAACTTGTTGCAGAAATGCGTAAACAAGCTGACGATGCAAGATCAAATACCATGTCAATGCCTTACAGAGTTCAGCGAATTGAAGAGTTCGTGAAACAATTAGAAATAGGAGATGTTAAACTCCGTGTCAGAGTTCTTGAGTCTGAACGAGCAGCTAAGAAGGCAACAATTTTGCAAATGGCAACAATGTATACAATATTAGGGGGTACCCTTGTAAACATTGGTGTCACATTTAGCACCCAAGGCAGCCAACTTATAGCAAACGGGTCCTTTGTTGCCGCAGGTGTTTTCATAGCTTTGCTTATTAGGTCAATGCAAAGGGTGAAGAAGCTTGATAAATTCGAAAAGATGATATAA | 2202 | 41.92 | MAAILASNSCYCRDVQFVNQGRTTDSLSFSRSVSNQKLDNQHECSLPKSQRFPKFHVKMQQTESPMKYGTNGRPANGQPVKLGANGKPVNLGANGQPVKLGSKGQPITMVSTSDVVNNKPTVGLVNGSAKAVNGTSLVRRETTPPLVKSVKVRESTGFPPSEELRVLPSDESFSWANENYNSVQRSIDVWSFVLSLRVRVLLDNAKWAYPGGFTEDKQKGRRRNTAAWLRERVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPEKAKGFIEKELGAPVNIIFKEFEERPIAAASLGQVHRAILHNGEKVVVKVQRPGLKKLFDIDLRNLKLVAEYFQRSETLGGPTRDWMGIYDECAKILYQEIDYINEGKNADRFRRDFRNIKWVRVPQVFWDYTATKVLTLEYVPGIKINNVDAIKDRSYSRSRISSRAIESYLIQILKTGFFHADPHPGNLAIDLDESLIYYDFGMMGEIKSFTRERLMDLFYAVYEKDAKKVMNSLVSLEALQPTGDMSPVRRSVQFFLDNLLNQSPDQETTLAAIGEDLFSIATDQPFRFPSTFTFVIRAFSTLEGIGYSLDPDFSFVKIAAPYAQELLDLKEQRPSGTQLVAEMRKQADDARSNTMSMPYRVQRIEEFVKQLEIGDVKLRVRVLESERAAKKATILQMATMYTILGGTLVNIGVTFSTQGSQLIANGSFVAAGVFIALLIRSMQRVKKLDKFEKMI | 733 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glco3g00928 | 733 | CDD | ABC1-ADCK3-like | 264 | 511 | - | - | |
| Glco3g00928 | 733 | SUPERFAMILY | Protein kinase-like (PK-like) | 266 | 512 | IPR011009 | - | |
| Glco3g00928 | 733 | Pfam | ABC1 atypical kinase-like domain | 264 | 510 | IPR004147 | - | |
| Glco3g00928 | 733 | PANTHER | CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED | 48 | 665 | IPR050154 | GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Glco3g00928 | K03688 | ubiquinone biosynthesis protein | ||||
| Glco3g00928 | K08869 | aarF domain-containing kinase |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Glco | Glco-Chr1:253919067 | Glco3g00928 | Glco-Chr3:53279558 | dispersed | |
| Glco | Glco-Chr3:53279558 | Glco6g00468 | Glco-Chr6:28573906 | dispersed | |
| Glco | Glco-Chr3:53279558 | Glco6g03496 | Glco-Chr6:354622788 | transposed |