AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01036 ATGAGGGAAGAAGGCATGAGCTCAACTGGGGACCCACCACTTCTTTTCCCCAATTCTACTACTGCTGCTGCTGCTAGTTCTGCTGGGGCATCATCACCAGCTTTTGCCACCAACGCTGGCGGTGCAGATTGGTTGGGTCCGGGGCAGGGATCCAAAGCAGGTTCTTTATCTCGGATCAGTTCACAACCAACGTGGATTTCGTTGAGCACAAGTGCTTGTGGTTCAGCTCTTGGCTCGTCCCAACCTTCATGTAGACCATGGGAAAGGGGTGATCTTCTTAGACGACTGTCCACATTCAGGCCTGCAAATTGGTTTGGAAAACCTAAGGCTGCTAGCTCACTTGCTTGTGCTAGAAGAGGGTGGGTGAATGTGGATGTTGATAAGATTCAATGCGAGTCTTGTGGTGCAAACCTGAAATATAATGCGCCGGATTCACGTACTCAAACGCAAGGTGAAAATGGTGAAGAATTTGCCAATCAGCTCGATGAAGGACACAATGTCACATGTCCATGGAGAGGAAACAGCTGTGCAGAAAGTTTAGTGCAGTTCCCACCTACTCCTCCATCAGCCCTTATCGGGGGTTATAAGGACCGTTGTGATGGACTCCTTCAGTTTCCATATCTACCTGTTGTGTCTGCTTCTGCCATCGAGCAGATGAAGCTTTCCAGAGGTCCAGAAATTGACCGCTTTCTGGTTCAGTCATCTGGTTTTCTAGTAGATATTGCATCTGACTTGGAGATAAGCGTATATTCACGTGCCCAGAAGTTAATAAGCCTTTGTGGATGGGAGCCAAGGTGGCTTTCAAATGTTCAAGACTGTGAAGAACATTCTGCTCAATCTGCTAGGAACGGTGCTTCTTTCAGTCCAATTAAAGATGACAGAAATCGTAACAAGAAATTACTGTCTTCTTCAACCAAAAAAATTCCTCGGGCCCCGTTAAAGTTTGAATCGAGATCACCACTGTTGGATTGCAGCTTATGTGGCGCCACAGTGAGAATCTTGGATTTTATTCGAGTTAATCGTCCAGCTCGTTTTGCTCCTAACAACATCGATGTTCCCGAAACAAGTAAAAAGATGGCACTTACTCGTGGGGTAAGTGCTGCTAGTGGAATTAGTGGGTGGGTGGCAGATGGTGGCGGGGAGAAAGAGCAAACGGAAGACATTGATGAAGCTGCAACCACCGGAGACGGGAAGTCCATGTCGAATATGAGGGTTGATTTAAATCTCACAATGGGAAGTGGGTTTCCTACAGGACACGGAAGCAAGAGACCAATGTCTGAACTATACCAAGAAGTAAATATAGGGAGGGATTTATTCATTGGGCAGCCAGCTGGCAGTGAGGTTGGCGATCGGGCACAATCATTTGAATCCCGAGGTCCTACTACTTTTAGAAGGAACATGGATGAAGGTGGGTCTACTGTTGATAGGCCACAAGAGACAGTTCGTCAGGCGGACAGTGTTGAAGGTGTTGTTATTGACCGTGATGGTGATGAAGTCAATGATAGTAAGATGTCCCCGGGCCCATCTAAACGTGCACGTGAGTCTCATGCCTTTGAACATTGTGAAGTATCGTTTGGTGTGGGCCCTAGCCAAACGTTGTATTTCGATATTGGAAGGGCGGTTCCTTCAAGTCAAGGCAATGAACTGACGGGCAGAGCTTCATCTGTTATAGCAATGGATACAGTTTGTCACAGTGATGATAACAATTCTATGGAAAGTGTCGAAAATCATCCCAGGTTTTTTGAAGAGATCAATTACCCATCTGGGTCAGGAGTCAAAAGTCCGGATGTCAATGATAATTCTGATTTAAATGTTAGTATTCAGGCTCAGCAAAGTGTGTGCCCGCCTGTGGTTCATGTCGCAGGTGAGTTAGGTGTTAGCAGCACCAATGACGACGAAGTACTGAACACTGATACTACCACGATTCACGGGCGGGATGGTCCTAGTTTTGCTATCAGTGGTGGTAGTGTTGGTATGGGTGTGAGTCATGAAGCTGAGATTCATGGCTCTGATGCTTTGATTCATCGGACAGAAAGTGTTGTCGGTGACATGGAACCTGTTACTGGTGTGACCGAAAATCAAGGTCAAACTGGTGAATTTGTTCCAGAGGAAGTGCAACAAGAATGTTCTGGAAGGGCAGATAGTGGGTCAAAGGTTGTTGGTTCGGTCAAGGCGGAATCTGTTGAGAGTGGTGACAAGACCAGTGATTTGAATCTTTTGCCACGTGAGCAGAGTGATCATCCGTCGCTTTCTTGCAACGCGGTTGTGTTTTCTGGGATTGAAGCATCAAAGGATGAAGTGACACAGGTGGGGAAGTCGTCTCCTAACGATGAATGTGGCTACCCAAGTTATCCGCCATCAAATGGTATAGGGCCTCCAAATGGAGAAAGTAACTTTGAAGAACCGGTTGAGTTTGATCCAATCAAGCTTCATAATTTCTTCTGCCCTTGGGTTAATGGAAACGTCGCTGCAGCTGGTGTTAGCAACAACACTAACGGTGCCAGTGCCAGCTCAAGTGTTAGCGGTCTAGCTCTCTGTGGCTGGCAGCTGACTTTGGATGCTTTAGATGGCTTCCAAGGACCTGAACAAAATCAAACTGTGGAATCTGAATCTGCTGCTTCTCTCTACAAGGATGAGCATCAAGTTTCTGGTCGAAAACTCGTGGCACGACACTCCTTCAACAGAAGCCATGGCCAGAGCTGA 2703 46.87 MREEGMSSTGDPPLLFPNSTTAAAASSAGASSPAFATNAGGADWLGPGQGSKAGSLSRISSQPTWISLSTSACGSALGSSQPSCRPWERGDLLRRLSTFRPANWFGKPKAASSLACARRGWVNVDVDKIQCESCGANLKYNAPDSRTQTQGENGEEFANQLDEGHNVTCPWRGNSCAESLVQFPPTPPSALIGGYKDRCDGLLQFPYLPVVSASAIEQMKLSRGPEIDRFLVQSSGFLVDIASDLEISVYSRAQKLISLCGWEPRWLSNVQDCEEHSAQSARNGASFSPIKDDRNRNKKLLSSSTKKIPRAPLKFESRSPLLDCSLCGATVRILDFIRVNRPARFAPNNIDVPETSKKMALTRGVSAASGISGWVADGGGEKEQTEDIDEAATTGDGKSMSNMRVDLNLTMGSGFPTGHGSKRPMSELYQEVNIGRDLFIGQPAGSEVGDRAQSFESRGPTTFRRNMDEGGSTVDRPQETVRQADSVEGVVIDRDGDEVNDSKMSPGPSKRARESHAFEHCEVSFGVGPSQTLYFDIGRAVPSSQGNELTGRASSVIAMDTVCHSDDNNSMESVENHPRFFEEINYPSGSGVKSPDVNDNSDLNVSIQAQQSVCPPVVHVAGELGVSSTNDDEVLNTDTTTIHGRDGPSFAISGGSVGMGVSHEAEIHGSDALIHRTESVVGDMEPVTGVTENQGQTGEFVPEEVQQECSGRADSGSKVVGSVKAESVESGDKTSDLNLLPREQSDHPSLSCNAVVFSGIEASKDEVTQVGKSSPNDECGYPSYPPSNGIGPPNGESNFEEPVEFDPIKLHNFFCPWVNGNVAAAGVSNNTNGASASSSVSGLALCGWQLTLDALDGFQGPEQNQTVESESAASLYKDEHQVSGRKLVARHSFNRSHGQS 900
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01036 900 MobiDBLite consensus disorder prediction 1 32 - -
Glco3g01036 900 MobiDBLite consensus disorder prediction 444 476 - -
Glco3g01036 900 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 898 - GO:0005634(PANTHER)
Glco3g01036 900 MobiDBLite consensus disorder prediction 766 801 - -
Glco3g01036 900 MobiDBLite consensus disorder prediction 710 747 - -
Glco3g01036 900 Pfam C3HC zinc finger-like 86 206 IPR012935 GO:0008270(InterPro)
Glco3g01036 900 MobiDBLite consensus disorder prediction 732 747 - -
Glco3g01036 900 MobiDBLite consensus disorder prediction 12 32 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01036 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr2:609037258 Glco3g01036 Glco-Chr3:60480068 dispersed