AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01084 ATGGGGAATAAGTTGGGTAGAAGGAGACAAATAGTTGATGAAAAGTATACAAAGCCGCAAGGGTTGTATCAGCATAAAGATGTTGATCATAAGAAGCTTAGGAAGCTTATACTTGATGCGAAGCTCGCTCCGTGTTATCCCGGTGATGATGATTGTAGCTGTGATCTTGAAGAGTGCCCAATTTGTTTCTTGTATTATCCAAGTTTGAATAGATCAAGATGTTGCACGAAAGGCATTTGCACCGAGTGCTTTCTCCAAATGAAGACACCGAATTCTACACGTCCTACGCAATGTCCGTTTTGTAAAACGTTGAATTACGCTGTGGAGTATAGAGGCGTGAAGAGTAAAGAGGAAAAGGGGCAGGAACAAATTGAAGAACAAAGGGTGATAGAAGCAAAAATAAGAATGAGACAGCAAGAAATTATAGATGAAGAGGAAAGAATGATAAAAAGGCAAGAGATGAGCTCATTGAGCGGGATAATCGAACCAAACGAGACTGAATATCTCTCCAGAGCAGCGGCATCTTTTTCTGGAAGTGAAGAAATTGTTTCTGTTCCACGGCCGAGTGGTACAGAAATTCAACATCCGCTGCGCTCTAGGGAGAACAGAGATGATGAATTTGACCTTGATCCTGAGAACATAATGCTTATGGAAGCCATTTGGTTGTCCTATCAGGAGGATAACAAGCACCAACACCATAACCCAAACTATGGCAATGCTGCACAACTAGCAAAATATGCAACCGAAGTTCGTGTATTAGCATCCATGGCTCCACAGTCCGAAATGGCATCAGCATCGTCATCCTCGTCGCCTTCTGGTGGTCTAGCATGCGCTATAGCCGCACTAGCCGAACGCCAACAAACGGGAGCAGAATCATCAACAAATTACAACAACTACGGTGTGAATACCTCAACATACAACATACATCCGGACCATAGCTCAACAGGGTTGTCACTTAATAACCATTTACAAATAAGCAGACAAGAACATGAATCATGGGGTGAAAATGTAATTGAACCTGAAACTGGTCACGGGTATGATCATTACGATGATGTCCACCAAGGAGGACAGTATGTGCAACAAGATGAGAATATAGTTCCTGAGAGCTTTGAAGAGCAGATGATGTTAGCTATGGCAGTTTCATTGGCTGAGGCTCGAGCTAGGACTAGTAGTAGTACACCAGAAGTCGCTTGGATTTAG 1200 42.92 MGNKLGRRRQIVDEKYTKPQGLYQHKDVDHKKLRKLILDAKLAPCYPGDDDCSCDLEECPICFLYYPSLNRSRCCTKGICTECFLQMKTPNSTRPTQCPFCKTLNYAVEYRGVKSKEEKGQEQIEEQRVIEAKIRMRQQEIIDEEERMIKRQEMSSLSGIIEPNETEYLSRAAASFSGSEEIVSVPRPSGTEIQHPLRSRENRDDEFDLDPENIMLMEAIWLSYQEDNKHQHHNPNYGNAAQLAKYATEVRVLASMAPQSEMASASSSSSPSGGLACAIAALAERQQTGAESSTNYNNYGVNTSTYNIHPDHSSTGLSLNNHLQISRQEHESWGENVIEPETGHGYDHYDDVHQGGQYVQQDENIVPESFEEQMMLAMAVSLAEARARTSSSTPEVAWI 399
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01084 399 ProSiteProfiles Zinc finger RING-type profile. 59 102 IPR001841 -
Glco3g01084 399 PANTHER PROTEIN SIP5 1 297 IPR039301 GO:0005737(PANTHER)
Glco3g01084 399 MobiDBLite consensus disorder prediction 180 206 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01084 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
99473 Glco3g01084 Glco9g03582
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr3:65148111 Glco9g03582 Glco-Chr9:470474515 wgd