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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01202 ATGTCTTATCACATTCCCATACTAATATTAATATCCACTTTATTACTCTCACTCACTTCCAGTAGAACCGTATTTAATGAGTCAACATTATTACTACCATCATCATCATCATCATCTGTTGTTGTTGTTGGTGAAATGAGTGGCGCGTGTCCATCACCTGACCCTGGACTCAACTACCGTCCGGTGATTGGGATAGTGAGTCATCCAGGTGATGGTGCGTCTGGTAGGCTGAGTAATGCTACCAATGCGTCTTATATCGCGGCTTCTTACGTTAAGTTTGTCGAGTCTGCTGGTGCTAGAGTTGTTCCCATTATCTATAATGAACCTATAGAGATTATTCGAAGAAAACTCGATCTAGTAAATGGAGTGCTTTTCACAGGTGGATGGTCTAAGACTGGCCTCTACTTTGATGTCATTGAGGAAGTGTTTAATCAAGTCCTGAAGAAGAATGATGCTGGTGAACATTTTCCGTTGCTTGCTATATGCTTAGGTTTTGAACTCGTGACAATGATTGTTAGCAAAAACAATAACATCCTTGAAGCCTTTAGTGCATCAGATCAAGCTTCCACACTGCAATTCACGAACAACATTAATATTGAAGAAACTTTGTTTCAAAGATTTCCTTCGGAGCTGGTTGCGAAGTTGAGCACAGAATGCCTTGTGATGCAAAACCATAAATACGGAATATCGCCTGAAACATTTCAAAAGACCAATGAACTATGCAGTTTCTTTAATGTCGTAACAACTAGTACCGACGAAAATAACAAGGTATATGTATCCACAGCTCAATCCAAGAGGTATCCCGTGACTGCTGTCCAGTGGCACCCAGAGAAAAATGCTTTTGAGTGGGCCTCGTCGGTGATTCCACATTCATATAATGCAATTCAAGTGACTCAACATGTTGCAAACTATTTCGTGAGCGAGGCTAGGAAATCCTTCAACAGACCGCCTAATGATGAAGTGCTAAAAAACCTTATATACAATTACAGCCCCACTTATTGTGGGGTGGCTGGGAAAGGTTACGATGAGGTTTACATCTTCACTGACAATGAAAAGATGGCTCGACTTTAA 1071 40.9 MSYHIPILILISTLLLSLTSSRTVFNESTLLLPSSSSSSVVVVGEMSGACPSPDPGLNYRPVIGIVSHPGDGASGRLSNATNASYIAASYVKFVESAGARVVPIIYNEPIEIIRRKLDLVNGVLFTGGWSKTGLYFDVIEEVFNQVLKKNDAGEHFPLLAICLGFELVTMIVSKNNNILEAFSASDQASTLQFTNNINIEETLFQRFPSELVAKLSTECLVMQNHKYGISPETFQKTNELCSFFNVVTTSTDENNKVYVSTAQSKRYPVTAVQWHPEKNAFEWASSVIPHSYNAIQVTQHVANYFVSEARKSFNRPPNDEVLKNLIYNYSPTYCGVAGKGYDEVYIFTDNEKMARL 356
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01202 356 Pfam Peptidase C26 61 277 IPR011697 GO:0016787(InterPro)
Glco3g01202 356 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 16 348 IPR015527 GO:0005773(PANTHER)|GO:0008242(InterPro)|GO:0034722(PANTHER)|GO:0046900(PANTHER)
Glco3g01202 356 FunFam Folate gamma-glutamyl hydrolase 57 348 - -
Glco3g01202 356 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 76 301 - -
Glco3g01202 356 Gene3D - 57 348 IPR029062 -
Glco3g01202 356 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 52 348 IPR015527 GO:0008242(InterPro)
Glco3g01202 356 SUPERFAMILY Class I glutamine amidotransferase-like 82 346 IPR029062 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01202 K01307 gamma-glutamyl hydrolase [EC:3.4.19.9]
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Event-related genes

Select Gene_1 Gene_2 Event_name
99485 Glco3g01202 Glco7g06913
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr3:74054275 Glco7g06913 Glco-Chr7:577765899 wgd