AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01253 ATGGGTCGGGTATTTTTGGTGGAGCTAGAAGGAAGAACTTACAAATGTAAATTTTGTAAAACCAATTTAGCTCTTGCTGAACATGTTGTTTCAAGGGGTTTTCATTGTCGCAGAGGAAAAGCTTATCTCTTCAGCAATGTGGTGAACGTGACTGCTGGACCGATTGAGGAGCGGATGATGCTTTCAGGATTGCACACCGTTACAGATATATATTGTGTATGCTGTGGACAAATTGTTGGCTGGAAATATGAGACTGCACACGAGCAATCCCAGAAGTATAAAGAAGGCAAATTTGTTCTGGAAAGAGGAAGGATCATTGACGGACTAGATGCAGAATTTTACATTGATACTCGTCCAAGTTCAAGTGACGCTGAAGAAGCCTAA 384 41.41 MGRVFLVELEGRTYKCKFCKTNLALAEHVVSRGFHCRRGKAYLFSNVVNVTAGPIEERMMLSGLHTVTDIYCVCCGQIVGWKYETAHEQSQKYKEGKFVLERGRIIDGLDAEFYIDTRPSSSDAEEA 127
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01253 127 Pfam Yippee zinc-binding-DNA-binding -Mis18, centromere assembly 14 105 IPR004910 -
Glco3g01253 127 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 106 IPR039058 -
Glco3g01253 127 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01253 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr3:78538811 Glco7g05145 Glco-Chr7:508017309 dispersed