AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01256 ATGTCAACACTCCTAGGTTCTTTTCGCACACATTTCATCAAACACCTTGTCTGCAATTCAATCCCATCATCATCACTCCACAATGTTCAACTTCTCAAACATGGAACCACATTCATTTCATCTAGTCCCACCACTAAAAACCCATCAACAATCTTAAAACCCTTCCTAAACTTAAGGTCACTTACCACACCATTTTGTACATTATCTGCTGACTCTGAAACAACATCATCTGCAAAAACTGGTGCTTATTTATCAGTAGATATACAATGTAGTCAGGAAACTGCAGATATGCTTTCTGAAGCACTTATGTGTTTTGGCGCGGTTTCGACAAGTTTGGTTGAACCAGACTCTTGTGATTCTAATAGTGAGGTCTCGCTTGGCTCGATATTTACTGTGTCTCATGATGTGCATCAAAGTATCGCATTGGCTGCGGATTCGATAGGGTTAAATGAAACACCTGTTTACAAAGTCACAACTGGTTACCAGTCTGATTGGATTGACAATGCTCGGGAATCTTTCAATCCTGTTAAAGTTAAGGAAGGGCTTTGGATTGTGCCTGAGTGGATAACTCCCCCGGATGATCAAGCAACAATTATAAGTCTAAATCCTGGGCTAGCGTTTGGAACAGGAGACCACCCTACCACCAAGCTATGTCTGTTGTTGCTACACAGTTTAATTAAAGGTGGAGAAACAGTTTTGGATTATGGGACAGGTTCAGGGATTCTTGCAATTGCAGCATTAAAGTTTGGTGCAGCTTCATCAGTTGGGTTCGATATAGATCCTCAAGCCATATCAGCTGCACGTCATAATGCTTCTTTAAACAGCATAGTACCAGATAAACTGCAATTGCAGATTGTTCCTAGTAACATTGATCCTTCGTCAACGGGCCAATGGCAATGGGCTATGACAGATGACAATGTAGAAGAGCAGGATTTAAATGATTTGGAAATTGTCACCAGAAAAGAAAAGTACGATGTGGTTGTTGCAAACATTCTTTTGAACCCGTTACTAAATTTGGCCGATCATATTGTTTCTTATGCTAAGCCTGGTGGTGTAGTTGGTCTATCTGGTATTATCTTAGAGCAGGTACCAACTGTTGTAGAGCGATACTCAGGTCTTTTGGAAGATATTACTGTGTCAGAAATCGAAGATTGGGCTTGCATAAGTGGCATAAAGAGGTCGATTAGTAGCTGA 1194 40.79 MSTLLGSFRTHFIKHLVCNSIPSSSLHNVQLLKHGTTFISSSPTTKNPSTILKPFLNLRSLTTPFCTLSADSETTSSAKTGAYLSVDIQCSQETADMLSEALMCFGAVSTSLVEPDSCDSNSEVSLGSIFTVSHDVHQSIALAADSIGLNETPVYKVTTGYQSDWIDNARESFNPVKVKEGLWIVPEWITPPDDQATIISLNPGLAFGTGDHPTTKLCLLLLHSLIKGGETVLDYGTGSGILAIAALKFGAASSVGFDIDPQAISAARHNASLNSIVPDKLQLQIVPSNIDPSSTGQWQWAMTDDNVEEQDLNDLEIVTRKEKYDVVVANILLNPLLNLADHIVSYAKPGGVVGLSGIILEQVPTVVERYSGLLEDITVSEIEDWACISGIKRSISS 397
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01256 397 Hamap Ribosomal protein L11 methyltransferase [prmA]. 81 392 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Glco3g01256 397 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 150 388 IPR029063 -
Glco3g01256 397 Gene3D Vaccinia Virus protein VP39 172 395 IPR029063 -
Glco3g01256 397 Pfam Ribosomal protein L11 methyltransferase (PrmA) 83 391 - -
Glco3g01256 397 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 83 393 IPR050078 GO:0005739(PANTHER)|GO:0008276(PANTHER)
Glco3g01256 397 CDD AdoMet-MTases 231 353 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01256 K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]