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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01264 ATGGAACCCCAAGAAAACCAAGCCAACTCACCATCATCCAACTGCAGCACCACCACTCAAACACCACCATTAACACCACGTCCCATCACCACAAGATCCGACCCTAATCCTTACCCTACCACCTTTGTTCAAGCTGACACTTCTTCCTTCAAACAAGTTGTCCAAATGCTCACTGGTTCATCAATCCCACCTACAGATTCATCATCAAACGGGTCAAACTCTTCCAAGACATCTATCCCTCCTGTGAAAAAACAAAGCTTCAAACTATACGAACGTAGGAACAGTTTGAACTTGAAAAACGGGTTGATGATAAACCCTATGGGTCCAAGATTTGGTTCCAGTTCATCATCTTCACCTAGGGTTGTTCAAGAGCTTTTGTCACCAAGTATACTTGATTTTCCATCTTTGGTTCTAAGTCCAGTTACACCTTTAGTTGAAGATCCATTTCATAAAAAAGAAGAAGAAGAAAGGGTTATTAAGGAAAAAGGGTTTTATTTACATCCGTCACCCAGAGCGACAACTCCACGTGGCTCCGTAGAGCCACGCTTGTTGCCGCTTTTCCCGATGACGTCCCCAAGGTCGTCATCATTGAGTTAG 597 43.72 MEPQENQANSPSSNCSTTTQTPPLTPRPITTRSDPNPYPTTFVQADTSSFKQVVQMLTGSSIPPTDSSSNGSNSSKTSIPPVKKQSFKLYERRNSLNLKNGLMINPMGPRFGSSSSSSPRVVQELLSPSILDFPSLVLSPVTPLVEDPFHKKEEEERVIKEKGFYLHPSPRATTPRGSVEPRLLPLFPMTSPRSSSLS 198
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01264 198 MobiDBLite consensus disorder prediction 1 85 - -
Glco3g01264 198 Pfam VQ motif 37 61 IPR008889 -
Glco3g01264 198 MobiDBLite consensus disorder prediction 34 82 - -
Glco3g01264 198 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 12 195 IPR039611 -
Glco3g01264 198 MobiDBLite consensus disorder prediction 161 198 - -
Glco3g01264 198 MobiDBLite consensus disorder prediction 1 27 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01264 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
99506 Glco3g01264 Glco7g07040
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr3:78766149 Glco4g05747 Glco-Chr4:548026305 dispersed
Glco Glco-Chr3:653457326 Glco3g01264 Glco-Chr3:78766149 transposed
Glco Glco-Chr8:390782667 Glco3g01264 Glco-Chr3:78766149 transposed
Glco Glco-Chr3:78766149 Glco7g07040 Glco-Chr7:581915823 wgd