Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glco3g01281	ATGAGCGGTGACACCAACTGTACTCGATTGGATCTGATCACCGTCATGTCAGCCAAATCAGCAATTCTACACGCCGCCGCCGTTGCCACGGCATTAGCTGCGGGTTACTATTACTACCGCCGATCCGCCACTCTTTTCCGGAGCCGGGTTGTCGGTATTATCCCGGCCCGGTTCGCTTCTTCCCGGTTTGAGGGTAAACCCCTTGTTCAAATTCTTGGAAAACCCATGATTCAGAGAACATGGGAGAGAGCAAAATTGGCGACAACATTGGATCGTGTTGTTGTGGCAACGGATGATGAAAAGATTGCAGAATGTTGTCGAGGATTTGGTGCTGATGTGATAATGACTGCAGAATCATGTAGAAATGGTGCTGAAAGGTGTAGTGAAGCACTTCAAAAGCTCGAGAAAAAGTATGATATTGTTGTCAATATTCAAGGAGATGAGCCTCTTATTGAACCTGAAATCATTGATGGCATTGTCAAAGCTCTTCAGACCACCCCAGATGCAGTTTTCAGCACTTGTGTTACAGCTTTGAAACCAGAAGATGCTTTTGATCCTAATCGTGTGAAATGTGTGGTTGATAACCGTGGTTATGCAATCTATTTCTCTCGAGGACTGATCCCTTTTAACAAGTCCGGGAAGGTCAATCCTGAATTCCCATACAATCTTCATCTCGGTATTCAGAGCTATGATTCAGAGTTTTTAAAGATTTATCCGGACTTGACACCAACTCCATTGCAACTAGAAGAAGATTTGGAACAGCTAAAAGTTCTTGAAAATGGTTACAAGATGAAGGTAATAAAAGTAGATCATGATGCTCATGGTGTTGATACTCCAGAAGATGTTGCCAAGATAGAAAATTATATGCGCGAAAGGAACTTGTCATAA	888	43.13	MSGDTNCTRLDLITVMSAKSAILHAAAVATALAAGYYYYRRSATLFRSRVVGIIPARFASSRFEGKPLVQILGKPMIQRTWERAKLATTLDRVVVATDDEKIAECCRGFGADVIMTAESCRNGAERCSEALQKLEKKYDIVVNIQGDEPLIEPEIIDGIVKALQTTPDAVFSTCVTALKPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKVNPEFPYNLHLGIQSYDSEFLKIYPDLTPTPLQLEEDLEQLKVLENGYKMKVIKVDHDAHGVDTPEDVAKIENYMRERNLS	295

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glco3g01281	295	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	50	292	IPR029044	-
	Glco3g01281	295	CDD	CMP-KDO-Synthetase	49	288	IPR004528	GO:0008690(InterPro)
	Glco3g01281	295	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	38	290	IPR029044	-
	Glco3g01281	295	FunFam	3-deoxy-manno-octulosonate cytidylyltransferase	48	290	-	-
	Glco3g01281	295	Coils	Coil	117	137	-	-
	Glco3g01281	295	PANTHER	3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE	19	294	-	GO:0005829(PANTHER)\|GO:0008690(PANTHER)
	Glco3g01281	295	NCBIfam	3-deoxy-manno-octulosonate cytidylyltransferase	52	282	IPR004528	GO:0008690(InterPro)
	Glco3g01281	295	Hamap	8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB].	48	290	IPR004528	GO:0008690(InterPro)
	Glco3g01281	295	Pfam	Cytidylyltransferase	51	263	IPR003329	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Glco3g01281	K00979	3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Glco	Glco-Chr3:80490212	Glco3g06958	Glco-Chr3:654847553	dispersed