AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01320 ATGGGGAAAACAGGAAGAGATTGGACTCAGATCTATACTATTTACGGAATGGAAGATTGGCATACGCCGATTTTTCTATTGCTACACGCGATCGTTTTTTCGGCTTCTTCGGTTGGGTTTTTGCTGTATTTTAACTGGATCTGTTACTCGTTTGAAATGATATCCCCGTCGCTGTTTTCGAACAGTGTTGCGAGGTTTGCGGCGGGGTTTACGGGATCTGTGACTGCTCTTTCGGCTGTTTGTTTGTTTTATGCCGCGGGGAATATGTTTTATTCATCCGTTGGGCTGCGTTGGGACATGGCGCAACGGATGGTTAATGCGGTACATGACTGGTCTACGGTTAAGACTGTGTTGGATGTCGGGTGTGGCCGGGGGATTCTTTTGAATACGGTTGCGATGCAGCTTAAGAAGGAAGGGAGTTCGGGGAGGGTTGTTGGGTTGGATAGGAAAAACACGACGTTATCGACTTTGAGGACTGCAGGTATGGAAGGAGTGCAGGAATACGTCACGTGCCGAGAAGGCGACGCGCGACGCCTCCCATTCCCGGACAACTACTTCGACGTAGTTGTATCCGCAGCTTTTGTCCACAAAGTCGGCAAAGAACACGGGACAAAAACCGCGGCAGCATCCGCAGAACGGATGCGCGTGGTGGGCGAAGTAGTCCGAGTACTAAAAGAGGGCGGTGTGGGAGTTGTATGGGACTTGGTACATGTCCCAGAATATGTACTTCGTTTACAAGAACTAAAAATGGAAGACATAAGAGTGTCGGAAAGAGTAACTGCGTTTATGGTTAATAGTCATATTGTGTCATTTCGTAAGCCCACACAGCACGTGTTGGGCCCCAATGAAGTGACATTAGATTGGAGATTTAACAATATCTGTTGA 885 48.02 MGKTGRDWTQIYTIYGMEDWHTPIFLLLHAIVFSASSVGFLLYFNWICYSFEMISPSLFSNSVARFAAGFTGSVTALSAVCLFYAAGNMFYSSVGLRWDMAQRMVNAVHDWSTVKTVLDVGCGRGILLNTVAMQLKKEGSSGRVVGLDRKNTTLSTLRTAGMEGVQEYVTCREGDARRLPFPDNYFDVVVSAAFVHKVGKEHGTKTAAASAERMRVVGEVVRVLKEGGVGVVWDLVHVPEYVLRLQELKMEDIRVSERVTAFMVNSHIVSFRKPTQHVLGPNEVTLDWRFNNIC 294
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01320 294 Gene3D Vaccinia Virus protein VP39 75 273 IPR029063 -
Glco3g01320 294 PANTHER EXPRESSED PROTEIN 1 289 - -
Glco3g01320 294 Pfam Methyltransferase domain 118 230 IPR013216 GO:0008757(InterPro)
Glco3g01320 294 CDD AdoMet-MTases 116 236 - -
Glco3g01320 294 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 90 273 IPR029063 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01320 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
99513 Glco3g01320 Glco6g01221
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr3:83582274 Glco6g01221 Glco-Chr6:67987332 wgd