AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01342 ATGGAATTCAATCCAAGAAATCCGTTACAAAAACGCAATCTTAGTGATCAAGCACCAATCCGTAAATACTTCGAACTCGAAGTTGATTACATGGTTTCTCCTGATTACTATCAACAACAGAAGCTTATCGCAATCAGATCGATTGCTATTTCATTTATTCATAAGTTTACACGTAATTATGTTGATGCGTTTGTGCCATATCTTGCTTTGACGTTTGTTGATCGATTCTTGTCGAGGATGAATGATATACCGGTTATTTATTACGGTGAAGGCGTTGAAAGAAATATGAAGATGTTTGTGTTCTGTTGCGTTTTGATTGCTTGTAAAATGTGCTATTCAAATTTCCCGTTTAGGCGATTCTTGTACGAGCACCGAGTTGCAGAGGTGAAGGATATTCTAGCTATGGAGCTTAGGATTTTGAAAGGTTTAGAATGGAGGGTAGGACCAGTGAACCCCATAACCTTCTTGCATTTCTTCCTTTCTTTGCTCACTACAAAAAGCGAGCGGCAATCCCCACCCTTCACACTGATACCTCAGATCATTGTTGCCATTCAAAAAGATATTAGATTCACGGAGTTTAGGCCTTCTACACTTGCGGCGTCAGTGATTTTATTAACATCCTACCACAGTTTACAGCCAAAGAAGCATTCAAAGTTCAGAAAAGAGATTTTCAGATTAAATATGGTTCAACAGACTGAAGTGGAGGAATGTTTTAATGAACTGAAGGAACATGTCATACCAGACTATATACTCCATCCTGAGAAACGCCAAAGGCTGTACAAAGAACCGTGCAGATTGTTGGGTGTGAGCCGAAGCAAAGGAAAAGAGCGACTGATCGAGGATCTTTCCTATGAAGATGTGGCTCAACCAAAGTATGCATCTGAGATTATAAAAGTGGTAGACGAACATGATGAGATTGATATGGAATTTGATACCAACTGGGTTGAACCCGAAACTTATGTTGAAGAGGAAAGGTACAGCCTAATTCGAGGACTTTTCGACTGCTTCTGGCCTATTATACTCAAATGCTTAGGATATGATTTTGGTGATAGATTCGACTGA 1062 39.45 MEFNPRNPLQKRNLSDQAPIRKYFELEVDYMVSPDYYQQQKLIAIRSIAISFIHKFTRNYVDAFVPYLALTFVDRFLSRMNDIPVIYYGEGVERNMKMFVFCCVLIACKMCYSNFPFRRFLYEHRVAEVKDILAMELRILKGLEWRVGPVNPITFLHFFLSLLTTKSERQSPPFTLIPQIIVAIQKDIRFTEFRPSTLAASVILLTSYHSLQPKKHSKFRKEIFRLNMVQQTEVEECFNELKEHVIPDYILHPEKRQRLYKEPCRLLGVSRSKGKERLIEDLSYEDVAQPKYASEIIKVVDEHDEIDMEFDTNWVEPETYVEEERYSLIRGLFDCFWPIILKCLGYDFGDRFD 353
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01342 353 CDD CYCLIN-AtCycD-like-rpt2 150 241 - -
Glco3g01342 353 PANTHER CYCLINS 17 222 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Glco3g01342 353 SUPERFAMILY Cyclin-like 20 147 IPR036915 -
Glco3g01342 353 Pfam Cyclin, N-terminal domain 22 147 IPR006671 -
Glco3g01342 353 Gene3D - 23 240 - -
Glco3g01342 353 Gene3D - 33 148 - -
Glco3g01342 353 Pfam Cyclin, C-terminal domain 150 245 IPR004367 -
Glco3g01342 353 SUPERFAMILY Cyclin-like 132 242 IPR036915 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01342 - -
leaf

Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Glco1g01389 . 18 357 Core Cell Cycle gene family AT5G10270 49.708 8.09e-114 346.0
Glco1g01470 . 13 434 Core Cell Cycle gene family AT5G25380 48.246 4.34e-137 399.0
Glco1g02324 . 18 366 Core Cell Cycle gene family AT5G10270 51.003 9.53e-120 364.0
Glco1g02666 . 26 982 Core Cell Cycle gene family AT3G12280 67.389 0.0 1306.0
Glco1g02794 . 17 369 Core Cell Cycle gene family AT5G10270 44.598 3.39e-94 298.0
Glco1g03293 . 20 290 Core Cell Cycle gene family AT1G66750 31.329 5.10e-29 117.0
Glco1g03314 . 8 302 Core Cell Cycle gene family AT3G54180 25.513 1.31e-12 67.0
Glco1g04452 . 1 220 Core Cell Cycle gene family AT5G48820 40.175 1.32e-35 122.0
Glco1g05201 ACH 99 259 Core Cell Cycle gene family AT5G27620 28.824 1.76e-10 58.5
Glco1g05269 ACH 1 221 Core Cell Cycle gene family AT5G48820 41.35 5.39e-41 137.0
Glco1g05680 . 293 384 Core Cell Cycle gene family AT2G26760 47.312 1.59e-21 84.7
Glco1g07729 . 1 430 Core Cell Cycle gene family AT1G76310 55.991 1.46e-157 449.0
Glco2g00547 . 1 478 Core Cell Cycle gene family AT5G10270 74.233 0.0 717.0
Glco2g01360 . 24 377 Core Cell Cycle gene family AT2G26760 50.549 6.92e-119 347.0
Glco2g01362 . 24 377 Core Cell Cycle gene family AT2G26760 50.275 1.15e-118 347.0
Glco2g01364 . 24 377 Core Cell Cycle gene family AT2G26760 50.413 1.46e-118 346.0
Glco2g01366 . 24 377 Core Cell Cycle gene family AT2G26760 51.24 2.79e-121 353.0
Glco2g01367 . 24 377 Core Cell Cycle gene family AT2G26760 50.549 3.09e-119 348.0
Glco2g01749 . 24 377 Core Cell Cycle gene family AT2G26760 48.476 9.19e-120 350.0
Glco2g02105 . 24 365 Core Cell Cycle gene family AT2G26760 51.282 2.01e-117 343.0
Glco2g02182 . 154 320 Core Cell Cycle gene family AT2G26760 56.287 1.06e-68 211.0
Glco2g02391 . 220 337 Core Cell Cycle gene family AT2G22490 36.667 1.08e-15 69.7
Glco2g02392 . 44 174 Core Cell Cycle gene family AT5G65420 52.273 3.04e-37 129.0
Glco2g03509 . 18 357 Core Cell Cycle gene family AT5G10270 46.176 3.05e-102 316.0
Glco2g03985 . 62 365 Core Cell Cycle gene family AT5G67260 47.785 2.87e-94 283.0
Glco2g04056 ACH 12 304 Core Cell Cycle gene family AT1G76540 30.671 2.11e-40 144.0
Glco2g04964 . 1 352 Core Cell Cycle gene family AT5G43080 57.103 4.38e-147 418.0
Glco2g04992 . 18 286 Core Cell Cycle gene family AT4G34160 47.902 8.46e-82 251.0
Glco2g05997 . 19 304 Core Cell Cycle gene family AT1G76540 25.223 1.05e-26 107.0
Glco2g06077 . 5 310 Core Cell Cycle gene family AT1G20930 46.372 1.40e-87 271.0
Glco2g06078 . 5 310 Core Cell Cycle gene family AT1G20930 46.688 4.03e-89 275.0
Glco2g06265 . 18 357 Core Cell Cycle gene family AT5G10270 52.493 2.03e-115 351.0
Glco2g06684 . 9 461 Core Cell Cycle gene family AT1G80370 48.707 5.00e-134 391.0
Glco3g00579 ACH 64 348 Core Cell Cycle gene family AT5G67260 50.163 1.60e-89 272.0
Glco3g01268 . 18 369 Core Cell Cycle gene family AT5G10270 52.975 2.46e-120 367.0
Glco3g01342 . 1 255 Core Cell Cycle gene family AT4G03270 29.057 4.84e-23 95.9
Glco3g01538 . 21 647 Core Cell Cycle gene family AT1G16330 42.618 5.71e-153 455.0
Glco3g03109 . 121 298 Core Cell Cycle gene family AT5G10270 56.18 9.71e-66 207.0
Glco3g03433 . 1 320 Core Cell Cycle gene family AT5G27620 58.75 1.81e-134 383.0
Glco3g03881 . 151 359 Core Cell Cycle gene family AT2G26760 49.282 2.01e-71 220.0
Glco3g04508 . 4 236 Core Cell Cycle gene family AT5G02110 29.412 4.83e-27 107.0
Glco3g04554 ACH 69 239 Core Cell Cycle gene family AT5G27620 23.889 5.30e-12 62.8
Glco3g04619 ACH 1 222 Core Cell Cycle gene family AT5G48820 42.857 5.63e-43 142.0
Glco3g05116 . 18 497 Core Cell Cycle gene family AT1G02970 52.727 2.27e-175 500.0
Glco3g07412 . 20 290 Core Cell Cycle gene family AT1G66750 31.034 4.09e-29 117.0
Glco4g00329 . 1 220 Core Cell Cycle gene family AT5G48820 36.087 5.70e-33 115.0
Glco4g01352 . 1 81 Core Cell Cycle gene family AT2G27970 87.654 2.63e-52 156.0
Glco4g02165 . 11 315 Core Cell Cycle gene family AT1G20930 84.59 0.0 545.0
Glco4g02240 . 121 459 Core Cell Cycle gene family AT1G44110 58.772 1.02e-137 406.0
Glco4g02244 . 121 459 Core Cell Cycle gene family AT1G44110 58.772 1.02e-137 406.0
Glco4g02246 . 121 459 Core Cell Cycle gene family AT1G44110 58.772 1.02e-137 406.0
Glco4g02288 . 101 459 Core Cell Cycle gene family AT1G44110 56.389 7.27e-143 413.0
Glco4g03391 . 29 184 Core Cell Cycle gene family AT2G26760 40.764 6.25e-26 99.0
Glco4g03712 ACH 14 308 Core Cell Cycle gene family AT1G76540 26.744 1.21e-28 112.0
Glco4g03801 . 6 434 Core Cell Cycle gene family AT5G25380 47.881 1.16e-139 407.0
Glco4g04697 . 18 357 Core Cell Cycle gene family AT5G10270 48.688 7.67e-104 323.0
Glco4g04869 . 154 384 Core Cell Cycle gene family AT2G26760 55.411 1.70e-92 275.0
Glco4g04870 . 154 384 Core Cell Cycle gene family AT2G26760 53.68 2.16e-90 270.0
Glco4g04873 . 330 410 Core Cell Cycle gene family AT3G11520 55.556 5.85e-25 94.7
Glco4g05157 . 112 377 Core Cell Cycle gene family AT2G26760 51.119 1.84e-90 275.0
Glco4g05164 . 111 377 Core Cell Cycle gene family AT2G26760 52.612 3.65e-95 290.0
Glco4g05363 . 1 353 Core Cell Cycle gene family AT5G43080 58.743 9.30e-148 419.0
Glco4g05387 . 7 353 Core Cell Cycle gene family AT5G43080 57.507 3.49e-141 403.0
Glco4g05389 . 2 353 Core Cell Cycle gene family AT5G43080 51.676 1.06e-121 353.0
Glco4g05396 . 279 352 Core Cell Cycle gene family AT5G43080 51.351 1.35e-20 81.3
Glco4g05397 . 22 247 Core Cell Cycle gene family AT5G43080 55.411 1.18e-81 246.0
Glco4g05399 . 279 352 Core Cell Cycle gene family AT5G43080 50.0 8.92e-20 79.0
Glco4g05400 . 22 247 Core Cell Cycle gene family AT5G43080 55.411 1.18e-81 246.0
Glco4g05404 . 97 353 Core Cell Cycle gene family AT5G43080 62.257 8.51e-122 349.0
Glco4g05407 . 97 353 Core Cell Cycle gene family AT5G43080 58.801 1.82e-112 326.0
Glco4g05409 . 243 353 Core Cell Cycle gene family AT5G43080 54.054 7.50e-39 131.0
Glco4g05410 . 1 353 Core Cell Cycle gene family AT5G43080 56.389 2.42e-141 403.0
Glco4g05549 . 18 367 Core Cell Cycle gene family AT5G10270 46.761 7.17e-107 329.0
Glco4g05851 . 111 384 Core Cell Cycle gene family AT2G26760 51.636 4.59e-98 297.0
Glco4g05853 . 111 384 Core Cell Cycle gene family AT2G26760 51.636 6.27e-98 296.0
Glco4g05856 . 111 384 Core Cell Cycle gene family AT2G26760 51.273 8.88e-98 295.0
Glco4g05858 . 111 384 Core Cell Cycle gene family AT2G26760 51.636 3.82e-98 297.0
Glco4g05859 . 111 384 Core Cell Cycle gene family AT2G26760 51.636 4.90e-98 297.0
Glco4g05861 . 111 384 Core Cell Cycle gene family AT2G26760 51.636 3.99e-98 297.0
Glco4g05863 . 111 384 Core Cell Cycle gene family AT2G26760 51.636 5.83e-98 296.0
Glco5g00259 . 18 379 Core Cell Cycle gene family AT5G10270 50.135 1.15e-121 366.0
Glco5g02271 . 12 419 Core Cell Cycle gene family AT4G28980 23.232 6.01e-14 73.9
Glco5g02642 . 11 377 Core Cell Cycle gene family AT2G26760 54.731 1.67e-142 409.0
Glco5g03313 . 20 309 Core Cell Cycle gene family AT1G76540 34.932 1.64e-55 186.0
Glco5g03397 . 1 294 Core Cell Cycle gene family AT3G48750 67.119 7.87e-150 419.0
Glco5g05118 . 31 459 Core Cell Cycle gene family AT1G44110 56.148 2.10e-162 472.0
Glco5g05984 . 14 304 Core Cell Cycle gene family AT1G76540 26.012 3.05e-28 112.0
Glco5g07358 . 1 83 Core Cell Cycle gene family AT2G27970 83.333 1.24e-52 157.0
Glco6g00171 . 43 300 Core Cell Cycle gene family AT5G65420 48.881 8.48e-80 243.0
Glco6g00357 . 297 495 Core Cell Cycle gene family AT1G02970 25.0 5.28e-06 47.4
Glco6g01016 . 91 163 Core Cell Cycle gene family AT3G48750 53.425 4.74e-23 87.4
Glco6g01368 . 1 294 Core Cell Cycle gene family AT3G48750 36.577 1.15e-63 206.0
Glco6g01371 . 1 294 Core Cell Cycle gene family AT3G48750 37.584 5.44e-66 212.0
Glco6g01372 . 10 230 Core Cell Cycle gene family AT1G66750 40.359 6.03e-53 172.0
Glco6g01436 . 18 357 Core Cell Cycle gene family AT5G10270 51.32 8.24e-114 345.0
Glco6g01839 . 18 379 Core Cell Cycle gene family AT5G10270 43.36 9.28e-100 312.0
Glco6g02353 . 2 316 Core Cell Cycle gene family AT4G37630 34.169 8.01e-48 160.0
Glco6g02530 . 20 459 Core Cell Cycle gene family AT1G44110 57.667 0.0 519.0
Glco6g02531 . 20 459 Core Cell Cycle gene family AT1G44110 57.667 0.0 519.0
Glco6g03181 . 2 309 Core Cell Cycle gene family AT3G54180 82.468 0.0 531.0
Glco6g06317 . 12 339 Core Cell Cycle gene family AT1G70210 58.929 7.37e-126 362.0
Glco7g00186 . 18 470 Core Cell Cycle gene family AT5G63610 77.204 0.0 718.0
Glco7g00385 . 1 504 Core Cell Cycle gene family AT5G10270 73.786 0.0 729.0
Glco7g00388 . 1 478 Core Cell Cycle gene family AT5G10270 63.168 0.0 620.0
Glco7g00423 . 18 367 Core Cell Cycle gene family AT5G10270 50.997 9.87e-116 355.0
Glco7g00823 . 14 430 Core Cell Cycle gene family AT1G76310 55.294 1.19e-150 432.0
Glco7g01331 ACH 15 357 Core Cell Cycle gene family AT5G67260 44.507 9.58e-90 272.0
Glco7g01655 . 18 366 Core Cell Cycle gene family AT5G10270 47.143 3.72e-110 337.0
Glco7g02981 . 17 371 Core Cell Cycle gene family AT5G64960 43.956 8.24e-94 300.0
Glco7g04505 . 1 294 Core Cell Cycle gene family AT3G48750 34.122 8.11e-59 190.0
Glco7g04521 . 1 287 Core Cell Cycle gene family AT3G48750 33.448 1.13e-56 184.0
Glco7g04524 . 1 172 Core Cell Cycle gene family AT3G48750 36.364 5.71e-33 117.0
Glco7g04525 . 1 294 Core Cell Cycle gene family AT3G48750 34.797 7.33e-60 193.0
Glco7g05732 . 18 390 Core Cell Cycle gene family AT5G64960 48.021 1.06e-114 353.0
Glco7g05742 . 20 312 Core Cell Cycle gene family AT1G76540 34.237 1.36e-54 182.0
Glco7g06906 . 20 366 Core Cell Cycle gene family AT5G10270 44.318 1.85e-91 288.0
Glco8g01526 . 76 337 Core Cell Cycle gene family AT2G22490 46.241 9.41e-72 225.0
Glco8g01697 ACH 7 323 Core Cell Cycle gene family AT4G37630 33.742 8.23e-52 172.0
Glco8g01724 ACH 12 304 Core Cell Cycle gene family AT1G76540 30.99 4.78e-41 145.0
Glco8g01738 . 12 304 Core Cell Cycle gene family AT1G76540 29.773 3.39e-44 152.0
Glco8g01868 . 86 195 Core Cell Cycle gene family AT1G49620 41.441 6.89e-21 84.0
Glco8g02077 . 18 357 Core Cell Cycle gene family AT5G10270 45.882 4.45e-100 311.0
Glco8g02570 . 1 294 Core Cell Cycle gene family AT3G48750 37.919 7.74e-61 198.0
Glco8g03536 . 36 429 Core Cell Cycle gene family AT1G20610 54.822 1.84e-143 412.0
Glco8g03583 . 311 459 Core Cell Cycle gene family AT1G44110 59.333 6.99e-57 182.0
Glco8g03584 . 101 245 Core Cell Cycle gene family AT1G44110 51.724 1.80e-41 151.0
Glco8g05096 . 1 294 Core Cell Cycle gene family AT3G48750 86.054 0.0 536.0
Glco8g05098 . 1 294 Core Cell Cycle gene family AT3G48750 86.054 0.0 536.0
Glco8g07119 . 13 309 Core Cell Cycle gene family AT1G20930 31.788 6.81e-45 154.0
Glco8g07125 . 13 309 Core Cell Cycle gene family AT1G20930 32.45 4.04e-46 157.0
Glco8g07128 . 1 195 Core Cell Cycle gene family AT2G38620 36.548 7.28e-26 99.8
Glco8g07346 . 6 391 Core Cell Cycle gene family AT1G18040 75.969 0.0 592.0
Glco9g00293 . 8 478 Core Cell Cycle gene family AT4G28980 53.992 3.39e-172 491.0
Glco9g01952 . 1 294 Core Cell Cycle gene family AT3G48750 32.45 8.84e-46 156.0
Glco9g02038 . 1 294 Core Cell Cycle gene family AT3G48750 36.7 2.20e-64 204.0
Glco9g02758 . 20 307 Core Cell Cycle gene family AT1G76540 35.172 3.45e-56 186.0
Glco9g03224 . 82 291 Core Cell Cycle gene family AT1G70210 45.37 6.99e-53 174.0
Glco9g03296 . 6 354 Core Cell Cycle gene family AT5G43080 46.089 8.79e-107 315.0
Glco9g03339 ACH 8 282 Core Cell Cycle gene family AT4G34160 51.37 2.42e-99 298.0
Glco9g03402 . 82 195 Core Cell Cycle gene family AT1G49620 42.373 6.78e-23 88.6
Glco9g03433 . 1 308 Core Cell Cycle gene family AT3G54180 35.873 6.81e-49 166.0
Glco9g03437 . 1 308 Core Cell Cycle gene family AT3G54180 35.873 7.72e-49 166.0
Glco10000053.1g00032 . 21 366 Core Cell Cycle gene family AT5G10270 45.739 6.14e-100 311.0
Glco10000127.1g00002 . 1 294 Core Cell Cycle gene family AT3G48750 36.242 6.27e-64 206.0
Glco10000183.1g00002 . 1 435 Core Cell Cycle gene family AT5G06150 51.002 7.04e-145 418.0
Glco10000317.1g00007 . 220 379 Core Cell Cycle gene family AT1G20610 68.125 1.13e-73 225.0
Glco10000506.1g00017 . 149 194 Core Cell Cycle gene family AT1G49620 56.522 6.18e-16 69.3
Glco10000566.1g00001 . 11 315 Core Cell Cycle gene family AT1G20930 84.262 0.0 542.0
Glco10000583.1g00012 . 121 222 Core Cell Cycle gene family AT5G48820 37.736 4.14e-18 75.5
Glco10000958.1g00009 . 175 376 Core Cell Cycle gene family AT3G11520 29.767 4.07e-23 100.0
Glco10001112.1g00010 . 24 376 Core Cell Cycle gene family AT2G26760 48.333 5.24e-119 348.0
Glco10001112.1g00016 . 24 374 Core Cell Cycle gene family AT2G26760 48.603 1.22e-117 344.0
Glco10001112.1g00017 . 24 377 Core Cell Cycle gene family AT2G26760 48.476 9.19e-120 350.0
Glco10001155.1g00003 . 121 459 Core Cell Cycle gene family AT1G44110 58.772 1.02e-137 406.0
Glco10001155.1g00005 . 121 459 Core Cell Cycle gene family AT1G44110 58.772 1.02e-137 406.0
Glco10002373.1g00001 . 1 222 Core Cell Cycle gene family AT5G48820 42.857 5.63e-43 142.0