AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01368 ATGTCTGGCATACAACTTGAGGTAGGATTCGAGGACCAGTCTCCACATAAATGGCGTGTTCCTCTAAAAGAAGACGTTTTTGCTGCATTTATGGCAAAAGGAGGTCCAATGGTGCATAAGGTTTTCGGTGTTAAATCGTTGTTTGGACCATTATTGTTTAAAAAGTTTTTTGATCCATCAGACGCGTTTCCACTTTGGGAATTTGAACCAGGTGTATTGTTGTCTGATCTTCAGAACCCGTGTGTGGATTGGTTCCAAACGGAAGGCTGTTATATTTTAAAATCCGAACTACCAAAACTAGAAAAACTGAGCATTCAAGTTTATGTCGACAACGGGAAAGTTATGGAAATCAGTGGGCTATGGAAGCACAAAGGAGAGTCCCGTGCAGCGGACTGGAGGAGTGGCAAATGGTGGGAACATGGCTTTGTTCGGAGGCTAGAATTGCCTGAAAACACAGACTGGAAGAAAATCGAGGCGTATGTGAATAATGACACCATTTTAGACATTAGACTTCCAAAAGAATCTGCATCTGCTAGCACTTAA 543 42.17 MSGIQLEVGFEDQSPHKWRVPLKEDVFAAFMAKGGPMVHKVFGVKSLFGPLLFKKFFDPSDAFPLWEFEPGVLLSDLQNPCVDWFQTEGCYILKSELPKLEKLSIQVYVDNGKVMEISGLWKHKGESRAADWRSGKWWEHGFVRRLELPENTDWKKIEAYVNNDTILDIRLPKESASAST 180
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01368 180 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 72 180 IPR002068 -
Glco3g01368 180 Gene3D - 51 180 IPR008978 -
Glco3g01368 180 Pfam Hsp20-alpha crystallin family 84 177 IPR002068 -
Glco3g01368 180 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 4 177 - -
Glco3g01368 180 SUPERFAMILY HSP20-like chaperones 57 177 IPR008978 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01368 - -