AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01373 ATGGAGTCGATAATAGCTCGAGCGTTGGAGTACACATTGAAATACTGGCTTAAATCCTTTACTAGAGATCAGTTCAAGTTACAAGGACGAACTGTCCAGCTTTATAATCTAGATATAAATGGCGATGCCTTGCACGCGAGCCTTGGATTGCCTCCGGCATTAAATGTTAAAACCGCGAAAGTCGGCAAGCTAGAGATTATACTCCCCTATTTTAGCAATGTACAAGTCGAGCCAATTGTTGTGCAAATCGATAAGCTTGATCTGGTGTTGGAGGAAAATGACGATTTGGATGCATATAAAAGTACAGATAGTGCCCAAACGCCATCCAGTCCGGCTAAAGCCAGTGGATATGGATTTGCAGACAAGATTGCAGATGGCATGACATTGGAAGTACGAACTGTCAATCTTTTAGTTGAGACTCATGGGGGTGCTAGACGTCGTGGAGGAGCAACTTGGGCATCACCGATGGCATCTATTACTATCCGCAACCTTTTGCTTTATACCACAAATGAGAACTGGCAGGTTGTAAATCTTAAGGAAGCGAGGGACTTTTCAAATGACAAGAAGTTCATCTATGTGTTCAAAAAGCTTGAATGGGAACATCTATCCATCGACCTCCTGCCTCACCCTGATATGTTTGCAGCATTTGCTGAGGGTGCATTTAAGGATGACGATGGTGCAAAGCGTGTGTTCTTTGGTGGGGAGCGCTTTCTTGAAGGGATATCTGGGGAAGCTTATATTACTATTCAAAGGACAGAGCTTAATAGTCCACTAGGGTTGGAACTCCAGTTACATATTACTGAAGCCGTGTGCCCTGCGTTGAGTGAACCAGGATTACGGGCTCTTCTTCGCTTCTTTACTGGATTTTATGTCTGTCTGAATAGAGGCGATGTCAATCCAAATGCTCAAGAGCGATCAGCAGAAGCTGCAGGGCGCACACTAGTCTCCATTATGGTGGACCATATATTCTTTTGCATCAAGGATACTGATTTCCAGTTAGAACTTATGATGCAGTCACTTATCTTTTCTCGGGCAAGTCTTTCTGATGGAGAAATCGCCAAATGCTTGACACGGGTGATGATAGGTGGAGTAATTCTGCGGGATACTTCCTCTCGCCCACCATGCGCGTTAGTGCAACCATCAACGCAGGATGCCGCAGAGGAACCACTGAAGATTCCAGATTTTGGAAAAGATTTCTGTCCTCCAATATATCCATTAGGTGATCAGCAATGGAAATTGAGCGACCGCATTCCACTCATATCCCTTCATTGTCTTCAGTTTATCCCCTCACCTACCCCGCCATCGTTTTCTACACAAACCGTCATTGACTGCCAGCCTCTTATGATACATCTTCAAGAAGATTCCTGTCTTAGAATATCATCTTTGCTAGCTGACGGGATTGTGGTTAATCATGGTGATATTCTACCAGATTACACTATCAACTCCCTTGAATTGAAAGTTAGAGGTTTAGATATCACTGTTCCAATGGAAAATCAGACCGAGAGCTCCTTCACTGGAGCAAGACTTCATATTGAGAACCTATTTTTTCATGACTCCCCTTCCCTGAGGCTCAAGCTGCTCAATCTTGACAAAGATCCTGCATGCTTCTGTCTATGGAAAGGACAACCCATTGACGCCAGTCAAAAGAAATGGACAAGTGGAGCTTCTCTTATTAATATGTCTCTAGAAACATGTAATAATTCAAAAGGATCCCGTTCACACTCTTCGGAGTTATGGAAATCTGTCGAGATAAAAGGTGTCTGTGTTCAAGTAGCAATGGTAACAGCAGACGGAAGCCCGATAATAGAAATCCCACCTCCAGGGGGAGTTGTTAGGGTAGGAGTCGCTTGTGAACAATATCTGTCCAACACTTCCGTGGAGCAACTATTTTTTGTTTTGGATCTTTATACATATTTTGGTACGGTCAGCGAGAAAATGGCATTGGTTGGAAAAAGTAAACAAAAGAAGGTGGTGAAGCGTGAACTATCTAATGGAAACCTGATAGAAAAGGTTCCTGGTGATACTGCTGTTAGTTTAGTAGTCAAGGACCTAAAGCTAACATTTCTTGAATCTTCCTCCATTGATATTCAGGGAATGCCTTTAGTTCAGTTTGTAGGGGAAGATTTGTTCATGGAAGTTACTCATAGAACCTTGGGTGGTGCCATGGCCATTTCGTCAACTTTAAAGTGGGACAGGGTTCAGGTGGACTGTGCAGAAACTGAGATAAGCTTGGTACATACGAATGATGTTGTTGTAAATGCTACCGAAGATTTTGTTCCTGTTCAAATTGGCTACCCAAAACTGAGAGCTGTCTTTTGGGTGCAAAATGGAAGTAACTTACCATTTGTGAATTTACGTATGGTGCATGTTATTCCATATAATGCACAGGATACAGAGTGTCATAGTTTAAGTGTTTCAGCTTGTATTGCGGGTGTGCGCCTTGCAGGAGGAATGAGTTACGCGGAAGCTCTTCTTCACCGATTTGGAATTTTAGGACCAGATGGTGGGCCAGGGGCTGGGCTCTCCAAGGGTTTGGACCATTTATCTGCCGGCCCATTGTCGAAACTTTTCAAACGATCACCCCTGCTTGTAGAGGACGCCAGGGAGAGTAAAGGTGAAAACGTAGAAGACGAGAATCATAGTGGTAACTTGCACTTGGGTGCACCAGATGATGTAGATATATCACTAGAATTGAAGGACTGGTTATTTGCATTGGAGGGTGCAGATATGGCAGAAAAATGGTGGTTATATAGCTCAGAGGATTCTTACAGAGAAGAGAGGTGCTGGCACACAACTTTTGACAGTATAAAAGCTAAAGCAAACAGCAGCAAGAAGTCCTTAGTGAATGGAAAAAAGAATTTTCCTGGCTCAAAGAAGTATCCTGTCGAATCAATGACGGTTGGTATTGAAGGCTTGAAGACGTTAAAACCCCAGCAGCATAAGGGAACTGCACCCCAGAACGGGCACAAGCAAATTGTGGAGTCATGTGGTGGTGTAGATTTTGAAGCTGATATAGTCTTGAATGAAGATGATGATGTCGATGGGATGATCAAATGGGTCTTGGAAAGTTTAAAATTTTCTGTGAAACATCCGGTTGAGGCAGTTGTAACCAAGGATGAACTGCAACATGTTGCTCAACTATGCAAGTCAGAAGTTGATTCCATGGGGCGAATAACTGCAGGAGTTTTACGTGTGTTAAAGTTAGAAGGATCAGTTGGTCAGTCAGCAATGAATCAACTAAGCAACCTTGGAAGTGAAGGGTTTGACAAGATATTTTCGCCAGAGAACCCGCGCAGAGATAGTACTGCTTCTAGTGCAGGCATGAGTCCATTTTCCCTAGTGGCTTCTGATAAGCAACATTCTTCGTCTTTCAATTCAACATTAAATTCACTCGAGGCTGCATTATTAGAATCACAGACAGATTGTGCAGCTCTTGTCACCGAACTAAGCACTATGGAGTCTCCAGAACCACACATCCATAGTGTAGAACAGCTCGCGCAGAAACTTGAGAGTATGCAGAAATTGTTATCACAGTTGCAGACTCGGGTATAA 3552 43.3 MESIIARALEYTLKYWLKSFTRDQFKLQGRTVQLYNLDINGDALHASLGLPPALNVKTAKVGKLEIILPYFSNVQVEPIVVQIDKLDLVLEENDDLDAYKSTDSAQTPSSPAKASGYGFADKIADGMTLEVRTVNLLVETHGGARRRGGATWASPMASITIRNLLLYTTNENWQVVNLKEARDFSNDKKFIYVFKKLEWEHLSIDLLPHPDMFAAFAEGAFKDDDGAKRVFFGGERFLEGISGEAYITIQRTELNSPLGLELQLHITEAVCPALSEPGLRALLRFFTGFYVCLNRGDVNPNAQERSAEAAGRTLVSIMVDHIFFCIKDTDFQLELMMQSLIFSRASLSDGEIAKCLTRVMIGGVILRDTSSRPPCALVQPSTQDAAEEPLKIPDFGKDFCPPIYPLGDQQWKLSDRIPLISLHCLQFIPSPTPPSFSTQTVIDCQPLMIHLQEDSCLRISSLLADGIVVNHGDILPDYTINSLELKVRGLDITVPMENQTESSFTGARLHIENLFFHDSPSLRLKLLNLDKDPACFCLWKGQPIDASQKKWTSGASLINMSLETCNNSKGSRSHSSELWKSVEIKGVCVQVAMVTADGSPIIEIPPPGGVVRVGVACEQYLSNTSVEQLFFVLDLYTYFGTVSEKMALVGKSKQKKVVKRELSNGNLIEKVPGDTAVSLVVKDLKLTFLESSSIDIQGMPLVQFVGEDLFMEVTHRTLGGAMAISSTLKWDRVQVDCAETEISLVHTNDVVVNATEDFVPVQIGYPKLRAVFWVQNGSNLPFVNLRMVHVIPYNAQDTECHSLSVSACIAGVRLAGGMSYAEALLHRFGILGPDGGPGAGLSKGLDHLSAGPLSKLFKRSPLLVEDARESKGENVEDENHSGNLHLGAPDDVDISLELKDWLFALEGADMAEKWWLYSSEDSYREERCWHTTFDSIKAKANSSKKSLVNGKKNFPGSKKYPVESMTVGIEGLKTLKPQQHKGTAPQNGHKQIVESCGGVDFEADIVLNEDDDVDGMIKWVLESLKFSVKHPVEAVVTKDELQHVAQLCKSEVDSMGRITAGVLRVLKLEGSVGQSAMNQLSNLGSEGFDKIFSPENPRRDSTASSAGMSPFSLVASDKQHSSSFNSTLNSLEAALLESQTDCAALVTELSTMESPEPHIHSVEQLAQKLESMQKLLSQLQTRV 1183
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01373 1183 Coils Coil 1162 1182 - -
Glco3g01373 1183 MobiDBLite consensus disorder prediction 1088 1107 - -
Glco3g01373 1183 PANTHER UNCHARACTERIZED 1 1180 IPR026728 -
Glco3g01373 1183 Pfam VPS13-like, N-terminal 1 102 IPR026854 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01373 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
99522 Glco3g01373 Glco6g01175
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3193772 Glco Glco3g01373 Glco-Chr3:88012030 Glco6g01175 Glco-Chr6:64629592