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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01399 ATGGAGGATATGTTAGTTGCGATTGTATCCATGCTTTTAATCGTGGCCTTAGTTCCTCTTTACTTGTGGAGACGTCGTCAAGTTACTAACGAGTCTCCTCACGAACACGATGAACCAGCTCAGGTTCAGCAAAGAGAGGCTGTTGTAAGGCCTGCTGGTGGTAGTCGTAGTCGGATGCGTAGACGGAATAATACTTCAGCAGCCAGCACGTCTTCTTCTGCTCCACAAACTGTAGAAGAAACTGAAGATGGAAGTGATGAAGAAGCTGTTGAAGGGGAATATTATAATGCAAAGAATTCGAAGAAGAAAGGAAGGAAGAAAGAAGAGCGTCAAGCAGCACGGCAGGCTGAAGAGGCAGCAAGGGAGTCCAGAAATACAAAACAAGACCGTTATGCAGAAATTCGCAGGAGAAAGGATGAGGAACACGAAGCAAAAGAGCGTATGCTGGAAGAAGAAGCTGCGGCTCGGAAGGCCAAGGAGGAGGAAGCTGCAGCATTAGAGTTTGATAAGTGGAAAGGAGAATTTTCGGTAGATGCTGAAGGTACTACAGAAAATGAAGTTCAAGATGGAACCCAGGGTTTGCTTTATGATTTTGTGGAATACATCAAGAAACAGAAATGTGTGCCCTTGGAAGATCTTGCAGCAGAATTCAAACTACGGACTCAGGATTGTATCAATCGAATTACTTCCTTGGAAGATATGGGGAGATTATCTGGTGTGATGGATGACAGAGGAAAATACATTTACATCTCACATGAAGAAATGCAGGCAGTTGCAGACTATATCAAACGTGAAGGGAGGGTCAGTATTGCCCATCTAGCAAGCCAGTCGAACCAGTTTATAGATTTGGAACCCAAAGCACAGTTTGTTGAGGATCTAAGCACTCAAGATGAAATTACAGTTGCTTGA 909 44.0 MEDMLVAIVSMLLIVALVPLYLWRRRQVTNESPHEHDEPAQVQQREAVVRPAGGSRSRMRRRNNTSAASTSSSAPQTVEETEDGSDEEAVEGEYYNAKNSKKKGRKKEERQAARQAEEAARESRNTKQDRYAEIRRRKDEEHEAKERMLEEEAAARKAKEEEAAALEFDKWKGEFSVDAEGTTENEVQDGTQGLLYDFVEYIKKQKCVPLEDLAAEFKLRTQDCINRITSLEDMGRLSGVMDDRGKYIYISHEEMQAVADYIKREGRVSIAHLASQSNQFIDLEPKAQFVEDLSTQDEITVA 302
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01399 302 FunFam DDRGK domain-containing protein 1 193 250 - -
Glco3g01399 302 Coils Coil 99 126 - -
Glco3g01399 302 SUPERFAMILY Winged helix DNA-binding domain 189 258 IPR036390 -
Glco3g01399 302 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 75 297 IPR050899 -
Glco3g01399 302 MobiDBLite consensus disorder prediction 58 79 - -
Glco3g01399 302 MobiDBLite consensus disorder prediction 109 160 - -
Glco3g01399 302 Coils Coil 131 169 - -
Glco3g01399 302 SMART DDRGK-2 97 282 IPR019153 -
Glco3g01399 302 Gene3D - 193 250 IPR036388 -
Glco3g01399 302 Pfam DDRGK domain 97 282 IPR019153 -
Glco3g01399 302 MobiDBLite consensus disorder prediction 31 160 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01399 K23344 DDRGK domain-containing protein 1
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3106920 Glco Glco3g01399 Glco-Chr3:89327520 Glco5g03189 Glco-Chr5:188042828