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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01531 ATGGAGGCGAAGAGAGTGGTGCATCCGGCAATCGAACCTCTGTCTTATCTCATCGGAACTTGGAAAGGTACCGGCGAAGGTGGTTTCCCCACCATTTCTTCCTTTTCTTACGGCGAAGAGCTCACCTTCACCCATCCTGGAAACAAGCCTGTAATAGCTTATTCCCAAAAGACTTGGAAGCTGAATTCTGGAGAGCCCATGCATGCCGAGAGCGGCTACTGGAGGCCAAAGCCTGATGGAACTATTGAGGTTGTCATTGCGCAGAGCACTGGTCTTGTGGAGATTCAGAAAGGAACATATGATGCTGAAAAGAAAGAGATAAACCTTCAAAGTGAGCTTGTAGGAAATGCGTCTAAGGTTAAAGAGATATCTCGCGTTTTCACTTTGGTTAATGAGGAATTAACTTACGTGGTTGAGATGGCTACCAATCTCAACAGTCGTCAGCCACATCTGAAAGCATCGCTCAAGAAACTATAA 477 46.12 MEAKRVVHPAIEPLSYLIGTWKGTGEGGFPTISSFSYGEELTFTHPGNKPVIAYSQKTWKLNSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEIQKGTYDAEKKEINLQSELVGNASKVKEISRVFTLVNEELTYVVEMATNLNSRQPHLKASLKKL 158
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01531 158 PANTHER THAP4 PROTEIN 4 158 IPR045165 -
Glco3g01531 158 Pfam THAP4-like, heme-binding beta-barrel domain 11 157 IPR014878 -
Glco3g01531 158 Gene3D - 6 158 IPR012674 -
Glco3g01531 158 SUPERFAMILY Lipocalins 7 157 IPR012674 -
Glco3g01531 158 CDD lipocalin-heme-bd-THAP4-like 11 157 IPR014878 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01531 K23205 THAP domain-containing protein 4