AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01615 ATGGAAACTGCAAAAGAAGAGTTTTTGAAGGAATATGGTGAGTCATATGGTTATGATCACAAGAACATTGATCAGATTAGAGCTACTGAGTTTAAAAGACTTAATGGGAGTGTGTATTTGGATCATGGCGGTGCAACTTTGTATTCAGAGCTGCAGATGGAAGCAGTTTTTAAGGATCTTACTTCTAGTGTTTATGCCAATCCTCATAGTCAAAGCAGCTCTAGCTTGGCCACCTCGGACATTGTAGAAGATGCTCGTCTTCAGGTTCTGAATATTTGTAATGCGTCTCCAAAAGAGTATAAGTGTATATTCACTTCTGGCGCAACAGCAGCTCTTAAACTCGTTGGCGAGGCTTTTCCGTGGAGCAGTCAAAGCACGTTCATGTATACAATTGAGAATCACAACAGTGTCCTAGGGATCAGAGAATATGCTCTTGATAAAGGGGCCGGAGCATTAGCAATAGACTTTGTGGAGGATTCAGAATCTTCTTCTAAGGTTTTAAAGCATCCTCTAAAGAAGCGAACTGAAGTTAAGACATTAGACAAAGCGCCTACTGATCACACATACAATTTATTTGCGTTCCCCTCGGAGTGTAATTTCTCAGGAGCAAGGTTCAATCTTGATTTGATAGACAGGATAAAGGACGATTCAGAACAATTATTGGAAGCTCCTGAACTTTCTAGGGGATGCTGGCTGGTCTTGCTTGATTCTGCAAAAGGATGTTCCACAGACCCTCCGGATTTATCAAAATATAAGCCTGACTTTGTTGCCATCTCATTTTACAAGCTCTTTGGTTACCCGACTGGACTTGGAGCTTTGATAGTTCGAAATGAGGCTGCAAAGTTACTAAAGAAGACCTACTTCAGTGGAGGCACAGTGGCTGCATCAATTGCGGATATCGACTATGTGAAAAGAAGAGACGGTATTGAGGAATCATTCGAAGATGGGACACTATCATTCATAAGTATAGCATCTATTCGCCATGGATTTGGGATCCTCAATTCTTTGACCACATTATCCATATCACGGCATACATCATCTCTTGCAAGATATACGAGAAATATGCTTTTGGCACTAAGGCATGCTGATGGGGAGCAAGTTTGCAAAATATATGGCATGGAGTATATAAAGGCAGTGTATAGCGGACTTGGTCCTGTGGTTTCTTTCAACTTGAAGCGCCCTGATGGTTCTTGGGTTGGCCATCGTGAAGTGGAAAAATTAGCTTCCTTATCTGGAATTCAGCTACGGACAGGGTGTTTTTGCAATCCTGGTGCATGTTCCAAGTATCTTGGTTTATCTCATTCAGATCTTCTCTCCAACATTGAGGCTGGACATGTTTGCTGGGATGATTATGATATATTAAACGGAAAACCTACTGGGGCCGTTAGAGTGTCTTTTGGTTATATGTCAACATTTGAAGATGCTTGGAAATTCATGAACTTCATTGTGAGCTCGTTTGTCCTGTTGCCTACCACTACTAGACATCTTTCGCGAATAAAATTAAGCTCTGTCCAGTCTGCACCAGAAGATTGCAGAACAACACATCATCTTACGTCAATTGTCGTGTATCCAATAAAGTCATGTGCGGGATTCAGAGTGGATAGTTGGCCTCTAAGCAGTACTGGATTATTATATGACCGGGAGTGGCTTCTCAAAAGCATGAATGGTGAAATTCTTACACAGAAGAAGGTACCTGAAATGTGCTTTATTGGTACAAAGATCGATCTCAAAACAGGAATACTTCATGTGGAATCTCCTCGTTGCCAAGAGAAGCTGCTTATCGAACTTAAAACAAATATTTTATCTGCGTTAGAAGAAATAAATGTACATGCCCAAAGATATGAAGTTCTGGGCTATGATAATGAGATTGACGCCTGGTTCAGCAAAGCAGTTGGCCGACCTTGTTATTTGTTAAGATCTAGTTCCAGAAGTTGTATCAGCTTGAACAGGAACAAAAATACGGGCACATGCAGAGACGTGGATACAAGATTAAACTTCGTTAATGAAGCTCAGATTTTACTGATATCCGAGGAAAGCGTATCTGACCTCAATCATAGATTGAATTCTGTTAAAACCGAAGGACCTGTTGGATTATTGCCTAGCGAAGTCGATGCAATGAGATTCAGGCCAAACCTTGTCATATCCGGTGGTGTTCCTTATGCTGAAGACAACTGGAGTAGTCTTAAGATTGGAAACAATCACTTCATGTCATTAGGCGGTTGCAACCGTTGCCAGATGATCAATATGAATTGTCAAGCTGGTGAGGTACAAAGATCAAATCAGCCTCTAGCTACTTTAGCGGCATACAGGAGGGCAAAGGGAAAGATACTCTTTGGAATATTATTGAGATATGAGTGTGAAAACGAGGTTAAGGAAGAAACGTCCTCGTGGCTTCAAGTGGGGCAAGAAGTACACCCTAATGCAGGATGA 2430 41.4 METAKEEFLKEYGESYGYDHKNIDQIRATEFKRLNGSVYLDHGGATLYSELQMEAVFKDLTSSVYANPHSQSSSSLATSDIVEDARLQVLNICNASPKEYKCIFTSGATAALKLVGEAFPWSSQSTFMYTIENHNSVLGIREYALDKGAGALAIDFVEDSESSSKVLKHPLKKRTEVKTLDKAPTDHTYNLFAFPSECNFSGARFNLDLIDRIKDDSEQLLEAPELSRGCWLVLLDSAKGCSTDPPDLSKYKPDFVAISFYKLFGYPTGLGALIVRNEAAKLLKKTYFSGGTVAASIADIDYVKRRDGIEESFEDGTLSFISIASIRHGFGILNSLTTLSISRHTSSLARYTRNMLLALRHADGEQVCKIYGMEYIKAVYSGLGPVVSFNLKRPDGSWVGHREVEKLASLSGIQLRTGCFCNPGACSKYLGLSHSDLLSNIEAGHVCWDDYDILNGKPTGAVRVSFGYMSTFEDAWKFMNFIVSSFVLLPTTTRHLSRIKLSSVQSAPEDCRTTHHLTSIVVYPIKSCAGFRVDSWPLSSTGLLYDREWLLKSMNGEILTQKKVPEMCFIGTKIDLKTGILHVESPRCQEKLLIELKTNILSALEEINVHAQRYEVLGYDNEIDAWFSKAVGRPCYLLRSSSRSCISLNRNKNTGTCRDVDTRLNFVNEAQILLISEESVSDLNHRLNSVKTEGPVGLLPSEVDAMRFRPNLVISGGVPYAEDNWSSLKIGNNHFMSLGGCNRCQMINMNCQAGEVQRSNQPLATLAAYRRAKGKILFGILLRYECENEVKEETSSWLQVGQEVHPNAG 809
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01615 809 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 3 487 - -
Glco3g01615 809 Gene3D Aspartate Aminotransferase, domain 1 330 487 IPR015422 -
Glco3g01615 809 ProSiteProfiles MOSC domain profile. 643 807 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Glco3g01615 809 Pfam Aminotransferase class-V 38 177 IPR000192 -
Glco3g01615 809 Pfam Aminotransferase class-V 232 475 IPR000192 -
Glco3g01615 809 SUPERFAMILY PK beta-barrel domain-like 660 770 IPR011037 -
Glco3g01615 809 SUPERFAMILY MOSC N-terminal domain-like 517 645 - -
Glco3g01615 809 Gene3D - 52 329 IPR015421 -
Glco3g01615 809 Pfam MOSC domain 661 804 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Glco3g01615 809 SUPERFAMILY PLP-dependent transferases 23 483 IPR015424 -
Glco3g01615 809 Hamap Molybdenum cofactor sulfurase [MOCOS]. 15 806 IPR028886 GO:0006777(InterPro)|GO:0008265(InterPro)
Glco3g01615 809 Pfam MOSC N-terminal beta barrel domain 516 634 IPR005303 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01615 K15631 molybdenum cofactor sulfurtransferase [EC:2.8.1.9]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr3:105492972 Glco8g06569 Glco-Chr8:547200875 dispersed