Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glco3g01730	ATGACTTCACCTTTTAATCAAAATCAACAACAACAATACGATCATCATCATCATCATCATCATCACCAAATCATGAACCCTAACCCTAACCACCATCAACCACCGCAACAACCACCCTACTCCGCCGCCTCATACCCCCCACCCTACACTCTCCAACCGCCTACCTACCCTAACTTCCCGCCAAATCTACAACACCAACACTCACTTCCATATCCAACTACCATAAACCCTAACCCTAATCCTAACCACGGGGCACGTCTCATGGCCTTACTCACACCACCGCAGTCTCCGTTACCCGACACCTCGTCAATGCCGCTACCAATGCCGTTGCAGAATGCTGGATTTGCCGGTGCGCCGAGTGTTGGACCGTTGCGAATGGCGAGTAGTAAGATGCCGAAAGGGCGGCATTTGGATGGGAGTAATGTGGCGTATGATATTGATGTGAGAATGAGTGGGGAAGTGCAGCCGCAGCTTGAGGTTACGCCGATTACGAAGTATGGTTCGGATACGAGTCTGGTTGTGGGGAGGAGGATTGCGGTTAGTAAGAAGTATATTTGTTATGGATTGAAGCCGGGGACTATTAGGGTGCTTAATTATCATACGGCGTTGAGATCGTTATTTAAAGGACTTTCTGAGAGGGTTACAGATATGGCTTTCTTTGCGGAGGATGTTCATCTTTTAGCCAGTGCAAGCATGGATGGACGAGTTTACGTATGGAAGGTTTCAGAAGGTCCTGATGAGGACGATAAGCCAGAGATCAGAGGAGATATAGTAATTGCAGTCGAATTTGTTGGGGAAGTAGAACCTGTTCGTCCTCGAGTTTGTTGGCACTGCCATAAACAGGAAGTTCTTGTAGTTGGAATCGGGAATCGTATTCTTAGAATTGATACTACAAAGGTTGGGAGAGGTAAAGTATGCTCTGCAGAGCAACCTCTCCGGTGCCCTGTTGATAAGTTGATTGATGGAATTCAGTTTGTTGGTAAGCATGATGGTGAAGTGACAGATCTTTCAATGTGCCAGTGGATGACCACTCGTCTGGCTTCTGCTTCTGTGGATGGAACGATAAAGATTTGGGAGGATCGCAAACAGTCACCAATTGCAGTACTAAGACCACACGATGGCCTTCCTGTCAACTCTGTAACATTCTTGACTGCTCCTCAGAGGCCAGATCACATCATACTTATCACTGGGGGCCCCTTGAATCGCGAAGTTAAATTATGGGCCTCAGATAGTGAAGAAGGGTGGTTGCTTCCTAGTGATGCTGATTCATGGCACTGTACTCAGACATTGGAGTTAAAGTCTTCTGCTGAATCTAGAATTGAAAATGCATTCTTTAATCAAGTAATTGCATTATCTCAATCTGGTCTTCTCTTGCTAGCAAATGCAAGGAAAAATGCTATATATGCTGTACATTTGGATTACGGGCCCAATCCAGAAACCACCCGTATGGATTACATTGCAGAATTCACAGTGACTATGCCAATATTGAGCTTTACTGGCATTAGTGATCCTTTACCAAATGGGGACCACATCGTTAAGGTTTATTGTGTCCAAACACAGGCCATTCAACAATACGCATTGGACTTGTCCCAGTGCCTACCACCTCCTGTTTATGATGTGCATGAGAAATCAGGCTTACCCGTTTCACACGACGAAACAAGTGCGGAACGTTTTATGGGTTTGGGACCGTCTAGTGATACATTGAAACCCTCTAGCTCTGATGTTCCACCTGTATCGATTCAGCGTCTGAGTTCTTCATCAGCCGAAGCTGATACTAAGCCAGTCTCATCATTAGTCACTAAGGATACTGATATATCTAGAGTCGTTTCACCAGCGGTTCCATTGAGTCCCAAGTTGTCTGAAAAAATATATGACTTCAGAAGTCCATCAAGCGGTTCTGATTCTCGCCATCAACTAAATAGTTTCGATGATCAAACAGTTGTGGAATATCCTGCTAACACGCGTTTGGAAGCTTCTCATTCTAATTTGTCTCATGCACCCTCATTGGATAGTGAAGAAAACAAAGTTGCAAAAGAGGACCGTTCTGTCAAGTTTATGCATCCAACTCATCTGGTTACTCCTGCCGAATTGATGGCCACGTCGTCATGCGAAGTAAATGATATTGCTGTGAATTCCGATACCCAGAATGCTGAGGTGGAGGTTAAAATTGTGGATGAAACAGGAATCAGTCAAAATGGTGACACTGCTTATGAAGTGAAAGAACAATCTAAATCTTTCTCCTCACAGGCATCAGCTCTTGGGCGCGATATGGCAAGAGATATGGTTAATGAGTCTAATCAGTTTGATGGAATTGTAGAAAGTAGGGTGTTGGATCAAACTTCAGATGCTCGGGGTGAACTTGGCGACGTAGTGATTGATCTTTCGGCGCCGGTTGAGATGTCTGTGACTGGAATACTTCAATCTGGGGATTCTGCATTGAAAGAGAAAAAGAATGCTCAAGCAGCAGGTCAAACTAGTTCTCCAAGTGTATCAAACTATACTGATTCTTGTGATGAAATAGGAGCGAGTTCAAGTATCTCCTCAGCGGAAGCCATACTTTCACAAATTGAGTCCATGAAAGAATTACTTGCTCAGGTTATACTCAACGAAAAGGAAATCCAAAAGCAGATTCCAGTGGCAGCTGCAGTACAGATTACAAAAGAAGGGAAGAGAATCGAGGCAGCCATTGGGAAGAGCATGGAGAAAATACATAAAGCTAATTCTGATGCTAGTTGGGCTCGTTCTCATGAAGAGTTCGCAAAACAGGAAAAATTAAACCAAGAACGCCATCAGCAAGTTTCGACTTCAGCCTCAGTTGCACACAAGGATTTGCTTGTGGCTGCAGAGAAAATGATGAAGAAGGAAATAGCTGCAGTTGTGCCAGCAGTTGGGCATGCGGTTACACCGATCATTGAAAAGGCCATCTCCACAGCTGTCACAGACTCTTTCCAGAGAGGTGTAGGTGATAAGGCTGTAAATCAACTTGAGAAAACAGTTAACTCTAAGCTGGAAGCAACTGTTTCTAGGCAAATTCAAGTACAATTTCAAACTTCTGGCAAACAAGCTCTGCAGGAAGCACTGAGGTTGAGCATGGAAGCGTCAGTTATTCCTGCCTTTGAGATGTCTTGCAAGACTATGTTTGAACAGGTTGATGCTACTTTTCAGAAGGGAATCGTTGAACATACAAATGCAACTCAGCAGAAAGTTGAGTCCACGCATTCACCATTGGCGTTTGCTTTGACGGATGTCATCAATTCAGCATCATCTGTGGCTCAAACTTTGACCAGTGAATTAGCTGATGGTCAAAGGAAATTGATGGCTCTTGCGGTTGCTGGAGCAAGTTCTAATCAGGCAAATCCATTGATAAGCCAACTAAGCAATGGTCCTACTGGGGGTTTCCATGAAAAGGTTGAGGCTCCGGTTGATCCAACAAAAGAGTTGTCTAGGTTGCTAAATGAGCATAGATATGAGGAGGCTTTTACTGCTGCCCTGCAAAGAAGTGATCTTCGAATCGTTTCTTGGTTATGCTCTCAGGTTGATCTACAAGGAATTTTAGCAAGTAATCCTATTCCTTTGACCCAAGGTGTACTACTATCGTTGCTGCAACAGCTGGCGTGTGATATTGGGAACGATACAACCCGAAAACTTTCATGGATGATGGATGTGGTGGTGGCCATCAGACCCTCAGATGGGATCATCGCAATGCATGTAAGGCCGATATTTGAACAAGTTTACTCGATACTTAACAATCAGGTGAACCTTCCGACGAATTCAGTTGCAGAGCTGTCCAGCTTACGTGTTGTCATTCAACTCGTAAATTCTACACTTAGGAGCCAGTGA	3840	44.38	MTSPFNQNQQQQYDHHHHHHHHQIMNPNPNHHQPPQQPPYSAASYPPPYTLQPPTYPNFPPNLQHQHSLPYPTTINPNPNPNHGARLMALLTPPQSPLPDTSSMPLPMPLQNAGFAGAPSVGPLRMASSKMPKGRHLDGSNVAYDIDVRMSGEVQPQLEVTPITKYGSDTSLVVGRRIAVSKKYICYGLKPGTIRVLNYHTALRSLFKGLSERVTDMAFFAEDVHLLASASMDGRVYVWKVSEGPDEDDKPEIRGDIVIAVEFVGEVEPVRPRVCWHCHKQEVLVVGIGNRILRIDTTKVGRGKVCSAEQPLRCPVDKLIDGIQFVGKHDGEVTDLSMCQWMTTRLASASVDGTIKIWEDRKQSPIAVLRPHDGLPVNSVTFLTAPQRPDHIILITGGPLNREVKLWASDSEEGWLLPSDADSWHCTQTLELKSSAESRIENAFFNQVIALSQSGLLLLANARKNAIYAVHLDYGPNPETTRMDYIAEFTVTMPILSFTGISDPLPNGDHIVKVYCVQTQAIQQYALDLSQCLPPPVYDVHEKSGLPVSHDETSAERFMGLGPSSDTLKPSSSDVPPVSIQRLSSSSAEADTKPVSSLVTKDTDISRVVSPAVPLSPKLSEKIYDFRSPSSGSDSRHQLNSFDDQTVVEYPANTRLEASHSNLSHAPSLDSEENKVAKEDRSVKFMHPTHLVTPAELMATSSCEVNDIAVNSDTQNAEVEVKIVDETGISQNGDTAYEVKEQSKSFSSQASALGRDMARDMVNESNQFDGIVESRVLDQTSDARGELGDVVIDLSAPVEMSVTGILQSGDSALKEKKNAQAAGQTSSPSVSNYTDSCDEIGASSSISSAEAILSQIESMKELLAQVILNEKEIQKQIPVAAAVQITKEGKRIEAAIGKSMEKIHKANSDASWARSHEEFAKQEKLNQERHQQVSTSASVAHKDLLVAAEKMMKKEIAAVVPAVGHAVTPIIEKAISTAVTDSFQRGVGDKAVNQLEKTVNSKLEATVSRQIQVQFQTSGKQALQEALRLSMEASVIPAFEMSCKTMFEQVDATFQKGIVEHTNATQQKVESTHSPLAFALTDVINSASSVAQTLTSELADGQRKLMALAVAGASSNQANPLISQLSNGPTGGFHEKVEAPVDPTKELSRLLNEHRYEEAFTAALQRSDLRIVSWLCSQVDLQGILASNPIPLTQGVLLSLLQQLACDIGNDTTRKLSWMMDVVVAIRPSDGIIAMHVRPIFEQVYSILNNQVNLPTNSVAELSSLRVVIQLVNSTLRSQ	1279

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glco3g01730	1279	SMART	WD40-4	320	359	IPR001680	GO:0005515(InterPro)
	Glco3g01730	1279	SMART	WD40-4	200	240	IPR001680	GO:0005515(InterPro)
	Glco3g01730	1279	SMART	WD40-4	362	408	IPR001680	GO:0005515(InterPro)
	Glco3g01730	1279	MobiDBLite	consensus disorder prediction	61	81	-	-
	Glco3g01730	1279	Pfam	Enhancer of mRNA-decapping protein 4, C-terminal	1148	1256	IPR049404	-
	Glco3g01730	1279	PANTHER	ENHANCER OF MRNA-DECAPPING PROTEIN 4	33	1278	IPR045152	GO:0000932(PANTHER)\|GO:0031087(PANTHER)\|GO:0031087(InterPro)
	Glco3g01730	1279	Gene3D	-	157	525	IPR015943	GO:0005515(InterPro)
	Glco3g01730	1279	MobiDBLite	consensus disorder prediction	31	60	-	-
	Glco3g01730	1279	MobiDBLite	consensus disorder prediction	565	595	-	-
	Glco3g01730	1279	ProSiteProfiles	Trp-Asp (WD) repeats profile.	326	368	IPR001680	GO:0005515(InterPro)
	Glco3g01730	1279	MobiDBLite	consensus disorder prediction	556	595	-	-
	Glco3g01730	1279	FunFam	enhancer of mRNA-decapping protein 4	159	473	-	-
	Glco3g01730	1279	Gene3D	-	1192	1278	IPR044938	-
	Glco3g01730	1279	ProSiteProfiles	Trp-Asp (WD) repeats profile.	207	249	IPR001680	GO:0005515(InterPro)
	Glco3g01730	1279	MobiDBLite	consensus disorder prediction	1	84	-	-
	Glco3g01730	1279	Pfam	WD40 region of Ge1, enhancer of mRNA-decapping protein	159	472	IPR032401	-
	Glco3g01730	1279	FunFam	Enhancer of mRNA-decapping protein 4	1192	1278	-	-
	Glco3g01730	1279	SUPERFAMILY	WD40 repeat-like	175	472	IPR036322	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Glco3g01730	K12616	enhancer of mRNA-decapping protein 4

Event-related genes

Select	Gene_1	Gene_2	Event_name
	99564	Glco3g01730	Glco6g00778
	99565	Glco3g01730	Glco7g07703

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Glco	Glco-Chr7:603606450	Glco3g01730	Glco-Chr3:115858049	transposed
	Glco	Glco-Chr3:115858049	Glco6g00778	Glco-Chr6:44157560	wgd