AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01846 ATGTTGAGAATTAAAAGGGTTCCTACTATTTTATCCAATTACCAAAAGGATGAAAATGAAGATGCTGCTGCTGGTGGCTGTGGTCGTAATTGTTTGAGAAATTGTTGCCTACCAGGGTCTAAGTTGCCCTTATATGCTTTTCCGAAATACGACAAGGTTGAATTGTCTGGCAGAAATGACTTTCCTTATGCTTTCTTGGACTCACTTCTCCTAGGAGAGTGGGAAGATCGAATGAACAGGGGGCTTTTTCGCTATGACGTTACTGCATGTGAAACCAAGGTGATTCCAGGTGAACATGGTTTCGTTGCTCAGCTGAATGAGGGTCGTCACCTCAAGAAACGCCCTACTGAGTTTCAAGTTGATAAAGTGCTGCAGCCCTTCGACGAGAACAAGTTCAACTTTACTAAAGTTGGGCAGGAGGAGGTGCTCTTCCAGTTTGAAGCAAGTGAAGACGGTGAAGTCCAGTTCCATCCAAGCGCTCCCATTGTTGTTGAGAATTCGCCAAGCGTTGTTGCCATTAATGTGAGTCCCATCGAATACGGACATGTGCTTCTGATTCCTAGAATTCTTGAATGCTTACCTCAAAGGATTGACCACGAGAGCTTATTGCTTGCACTATACATGGCACATGAGGCTGCAAGTGCATACTTCCGTCTAGGCTACAATAGCTTGGGGGCATTTGCTACTATCAATCACCTTCACTTCCAGGCTTACTACTTGGCTGTGCCATTTCCAATCGAGAAAGCTGCGTCTAGAAAGATAACTGATTTTAATGCTGGGGTCGAGATTTCTGAGATTCTCAACTATCCTGTCAAAGGTCTCATCTTTGAGGGTGGAAATTCACTTGAAGATTTATCCAATGTAGTGGCTGATACCTGCATATGCCTTCAAGATAACAACATACCCTACAATGTCCTCATTTCAGAATCTGGCAAACGCGTCTTTGTCCTTCCACAGTGCTATGCAGAGAAGCAGGCTCTCGGGGAAGTGAATTCTGAGCTTCTAGATACCCAAGTGAACCCTGCTGTTTGGGAAATCAGTGGACATATTGTGTTGAAAAGGAAAGAGGACTATGAAGGGGCATCCGAGAATCAAGCTTGGAGACTTCTTGCAGAGGTTTCTTTGTCTGAAGAAAGGTTCCAGGAAGTGGTAGCCATTATATTTGAAGCCATTTCATGTGCTGTTATCGAGAGGATGCTGTCTGAGGATGAGCAAGATGTTGACAAAGTTGGTGGTCGTAACAATGGTCCCCGTGCAGCCGTCATGCCAGGGAAGCATGAATGCCTAGTTCAACACTAG 1299 44.8 MLRIKRVPTILSNYQKDENEDAAAGGCGRNCLRNCCLPGSKLPLYAFPKYDKVELSGRNDFPYAFLDSLLLGEWEDRMNRGLFRYDVTACETKVIPGEHGFVAQLNEGRHLKKRPTEFQVDKVLQPFDENKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIVVENSPSVVAINVSPIEYGHVLLIPRILECLPQRIDHESLLLALYMAHEAASAYFRLGYNSLGAFATINHLHFQAYYLAVPFPIEKAASRKITDFNAGVEISEILNYPVKGLIFEGGNSLEDLSNVVADTCICLQDNNIPYNVLISESGKRVFVLPQCYAEKQALGEVNSELLDTQVNPAVWEISGHIVLKRKEDYEGASENQAWRLLAEVSLSEERFQEVVAIIFEAISCAVIERMLSEDEQDVDKVGGRNNGPRAAVMPGKHECLVQH 432
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01846 432 SUPERFAMILY HIT-like 158 236 IPR036265 -
Glco3g01846 432 PANTHER GDP-D-GLUCOSE PHOSPHORYLASE 1 3 393 IPR026506 GO:0005737(PANTHER)|GO:0006006(PANTHER)|GO:0080048(InterPro)|GO:0080048(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01846 K14190 GDP-L-galactose phosphorylase [EC:2.7.7.69]
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Event-related genes

Select Gene_1 Gene_2 Event_name
99578 Glco3g01846 Glco6g01002
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr2:174366797 Glco3g01846 Glco-Chr3:122919847 dispersed
Glco Glco-Chr3:122919847 Glco6g01002 Glco-Chr6:54143807 dispersed