AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco3g01885 ATGACAGAACTAAACTCACTGATTAAGGAGTTAAAGTTGATTCTATATGGTGATGATGAATCAGAACCTTGCGAGGAAGCTTGCACACAGTTGACTGAGGAGTTCTTCAAAGAAGATACATTACGTCTCCTTATTATCTTTCTTCCAAAGTTAAACTTGGAGGCACGTAAGGATGCCACCCAAGTTGTTACAAGTTTGCAAAGGCAATCCTTACCATCACGCTTTCGGGCTTCAAGATATTTGGAAGCTAATTTAGATCTTGTAGACATTCTCATATCTGGGTATGATGATCCTCAGTTAGCTCTTCATTATGGCAGAATGTTAAAGGAGTGCCTCCGCCATCAAATTGTCGCATGTTACTTATTGGAACCAAGTCAGCTGAAGAAACTTTTTGTTTATATACAACATCCAAGTTTTGATATCGCTGCAGATGCTGCAGACGTATTTAAGGATCTCTTGACTAGGCATAAGTCTACTGTTTCCCTCTCTCTGTCCAGTAACTATTCTTGGTTTTTCACTGAATTTAACGAACAGCTATTGAAATCTACGAACTATATCACCAAAAGACAAGCTGTCAAGCTGCTGGGAAGCATATTGCTTGATCGTGCAAATTTTTGTGTTATGACACGCTATGTGAGCTCAAAAGACAACCTAATAATTCTAATGAATCTTTTAAGGGATCCAAGTAAGAGCATCCAGATAGATGCTTTTCATGTGTTCAAGCTTTTTGTAGCAAATGAAAACAAGCCTAATGAAATAGTAACCATACTTGTTACAAATAGAAGCAAGCTTCTACGTTTATTAGCTGCTTTTGTACATCCAGACGATGAAGTGTTTGAGACGGACAAACATCAAGTGATGAATGAACTTGCTGCTCTGGAAGTTGAAGACTAA 894 38.14 MTELNSLIKELKLILYGDDESEPCEEACTQLTEEFFKEDTLRLLIIFLPKLNLEARKDATQVVTSLQRQSLPSRFRASRYLEANLDLVDILISGYDDPQLALHYGRMLKECLRHQIVACYLLEPSQLKKLFVYIQHPSFDIAADAADVFKDLLTRHKSTVSLSLSSNYSWFFTEFNEQLLKSTNYITKRQAVKLLGSILLDRANFCVMTRYVSSKDNLIILMNLLRDPSKSIQIDAFHVFKLFVANENKPNEIVTILVTNRSKLLRLLAAFVHPDDEVFETDKHQVMNELAALEVED 297
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco3g01885 297 Gene3D - 1 294 IPR011989 -
Glco3g01885 297 PANTHER CALCIUM-BINDING PROTEIN 39-RELATED 1 294 IPR013878 GO:0035556(PANTHER)|GO:0043539(PANTHER)
Glco3g01885 297 Pfam Mo25-like 2 293 IPR013878 -
Glco3g01885 297 SUPERFAMILY ARM repeat 7 293 IPR016024 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco3g01885 K08272 calcium binding protein 39
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Event-related genes

Select Gene_1 Gene_2 Event_name
99591 Glco3g01885 Glco7g07305
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr3:126161882 Glco3g07495 Glco-Chr3:675108761 dispersed
Glco Glco-Chr3:126161882 Glco9g03678 Glco-Chr9:477589659 transposed