Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glco7g02057 | ATGGCAAACCCCGCCGCCGTAAACTTGCTCACAAACATCGCACGCGTCGCCATCGGCCTCGGTGCAACCGCCACAGTCGCCAGCTCAGCTCTCTACACCGTCGACGGCGGTCAACGCGCCGTCTTGTTTGACCGTTTCCGTGGAGTCATCGATGAAACTGTTGGTGAAGGCACTCACTTCTTGATCCCGTGGCTTCAGACTCCTTACATTTTCGACATCCGTACTAGGCCACATACTTTCTCCTCAATTTCCGGAACGAAAGATCTTCAGATGGTCAACTTAACTCTCCGTGTGCTTTCGCGTCCTGAGGTTAACCGTCTTCCAGCCATTTTCAAGACCCTAGGGACAGAGTATGATGAGAAAGTGTTGCCTTCTATTGGTAACGAGGTTTTGAAAGCTGTTGTGGCTCAGTTTAATGCTGATCAGCTTCTTACTGAGCGTCCCCAGGTGAGCGCCTTGGTTAGGGACAGTTTAGTGAAGCGTGCCAAAGACTTTAACATTTGTTTGGATGATGTGGCAATTACACACTTGTCGTATGGTGCCGAGTTTAGTAGGGCGGTTGAGCAGAAGCAGGTGGCGCAACAGGAGGCTGAGAGGAGTAAGTTTGTTGTGGCGAAAGCGGAGCAGGAGAGGCGAGCTGCGATTATTAGGGCAGAAGGTGAGAGTGAGAGTGCTAAGCTGATTTCAGATGCGACTAGTGCTGCTGGTATGGGGTTGATTGAGTTGAGGAGGATTGAGGCGAGTAGGGAGATTTCGACTACTTTGGCTAGGAGTGGGAATGTTATGTATCTGCCGAATTCCGGGAGTCAGATGTTGCTTGGACTTAATCCCTCTCGTTAG | 840 | 50.83 | MANPAAVNLLTNIARVAIGLGATATVASSALYTVDGGQRAVLFDRFRGVIDETVGEGTHFLIPWLQTPYIFDIRTRPHTFSSISGTKDLQMVNLTLRVLSRPEVNRLPAIFKTLGTEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPQVSALVRDSLVKRAKDFNICLDDVAITHLSYGAEFSRAVEQKQVAQQEAERSKFVVAKAEQERRAAIIRAEGESESAKLISDATSAAGMGLIELRRIEASREISTTLARSGNVMYLPNSGSQMLLGLNPSR | 279 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glco7g02057 | 279 | SMART | PHB-4 | 30 | 191 | IPR001107 | - | |
| Glco7g02057 | 279 | PRINTS | Prohibitin signature | 186 | 209 | IPR000163 | GO:0016020(InterPro) | |
| Glco7g02057 | 279 | PRINTS | Prohibitin signature | 92 | 111 | IPR000163 | GO:0016020(InterPro) | |
| Glco7g02057 | 279 | PRINTS | Prohibitin signature | 138 | 154 | IPR000163 | GO:0016020(InterPro) | |
| Glco7g02057 | 279 | PRINTS | Prohibitin signature | 209 | 225 | IPR000163 | GO:0016020(InterPro) | |
| Glco7g02057 | 279 | PRINTS | Prohibitin signature | 115 | 133 | IPR000163 | GO:0016020(InterPro) | |
| Glco7g02057 | 279 | PRINTS | Prohibitin signature | 161 | 180 | IPR000163 | GO:0016020(InterPro) | |
| Glco7g02057 | 279 | PRINTS | Prohibitin signature | 74 | 90 | IPR000163 | GO:0016020(InterPro) | |
| Glco7g02057 | 279 | Gene3D | Band 7 domain | 59 | 193 | IPR036013 | - | |
| Glco7g02057 | 279 | SUPERFAMILY | Band 7-SPFH domain | 62 | 198 | IPR036013 | - | |
| Glco7g02057 | 279 | Pfam | SPFH domain - Band 7 family | 33 | 210 | IPR001107 | - | |
| Glco7g02057 | 279 | PANTHER | PROHIBITIN | 4 | 277 | IPR000163 | GO:0005739(PANTHER)|GO:0007005(PANTHER)|GO:0016020(InterPro) | |
| Glco7g02057 | 279 | Coils | Coil | 190 | 210 | - | - | |
| Glco7g02057 | 279 | CDD | SPFH-prohibitin | 31 | 225 | IPR000163 | GO:0016020(InterPro) | |
| Glco7g02057 | 279 | FunFam | Prohibitin 2 | 59 | 193 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Glco7g02057 | K17080 | prohibitin 1 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Glco | Glco-Chr7:342088270 | Glco8g06776 | Glco-Chr8:557182783 | dispersed |