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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco7g02097 ATGGAAAATGATTTCGATCGCCTTCTTTTCTTCGAACACGCTCGCCGTACTGCCGAAGTCACTTACACCAAAAACCCACTCGATACCGAGAATCTAACTAGATGGGCGAGCGCGTTGCTCGAGTTATCCACTTTTCAACCTATTCAGGACTCCAAACTTATGATTAAACTTGCAATATCAAAATTGGATGAAGCGTTAAAGATTGATCCCAGGAAACATGATACGTTGTGGTGTATGGGAAATGCGCAAACTTCTTATGCTTTTGTGACTCCTGATGAGGATGAAGCTAAGGGTTATTTTGATTCGGCGCATGTTTATTTTCAGCAGGCTGTTGAAGAGGATCCAGGGAACGAGCTTTACCGTAAGTCATTGGAAGTGGCTGTAAAGGCTCCTGCATTACACGCCGAGGTCCATAAACAGGGTGTTATTCAACAAGCTATGGGACCAGTGGCAGGAGGCGGTCCTTCAACCTCTTCTAGTAGTATCAGGGGCCCGAAGACACAAAAGAGCAGCGATCTGACATATGATATATTTGGGTGGGCTATTCTTGTTGTTGCTATTGTGGCATGGGTTGGATTCGCGAAAACAAATGTACCTCCACCACCTTCTCATTAA 615 44.88 MENDFDRLLFFEHARRTAEVTYTKNPLDTENLTRWASALLELSTFQPIQDSKLMIKLAISKLDEALKIDPRKHDTLWCMGNAQTSYAFVTPDEDEAKGYFDSAHVYFQQAVEEDPGNELYRKSLEVAVKAPALHAEVHKQGVIQQAMGPVAGGGPSTSSSSIRGPKTQKSSDLTYDIFGWAILVVAIVAWVGFAKTNVPPPPSH 204
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco7g02097 204 MobiDBLite consensus disorder prediction 151 168 - -
Glco7g02097 204 Pfam Plant specific mitochondrial import receptor subunit TOM20 5 195 - -
Glco7g02097 204 Gene3D Tetratricopeptide repeat domain 1 147 IPR011990 GO:0005515(InterPro)
Glco7g02097 204 SUPERFAMILY TPR-like 11 125 IPR011990 GO:0005515(InterPro)
Glco7g02097 204 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED 2 203 IPR010547 GO:0005742(InterPro)|GO:0045040(InterPro)
Glco7g02097 204 MobiDBLite consensus disorder prediction 147 168 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco7g02097 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
100374 Glco7g02097 Glco8g02397
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr6:606722363 Glco7g02097 Glco-Chr7:344152112 dispersed
Glco Glco-Chr1:156500659 Glco7g02097 Glco-Chr7:344152112 wgd
Glco Glco-Chr7:344152112 Glco8g02397 Glco-Chr8:129315669 wgd