Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glco7g02099 | ATGCCTTCATTAATCCCAGAAGAACCACTTCTAACCCCAACCGAAGACAGGTTCTGCATGTTCCCAATTCACTACCCTCAAATATGGGAAATGTACAAAAAAGCCCAAGCTTCTTTCTGGACTGCAGAAGAAGTCGACTTATCATCAGATATCCGTCACTGGGAGTCGTTAACTGATGGAGAACGTCATTTCATCACACACGTTCTCGCGTTTTTTGCCTCTTCTGATGGCATTGTGTTGGAGAATTTGGCTACTAGGTTTATGAGTGACGTCCAAGTAGCGGAAGCCAGGGCTTTTTACGGGTTTCAAATTGCAATAGAGAATATACATTCCGAGATGTATAGTTTGCTTTTGGAAACATATGTGAAGGATGGGAAGGAGAAAGATAGGTTGTTTAGGGCTGTCGAGACCATTCCTTGTGTCGAGAAAAAGGCCAAGTGGGCGATGAAGTGGATCCAGGGCTCCGAGTCGTTTGCTGAGAGGATTATTGCCTTTGCGTGTGTTGAAGGTATATTCTTCTCAGGAAGTTTTTGCGCGATATTTTGGCTCAAAAAGCGCGGGTTAATGCCAGGGCTAACCTTCTCAAACGAGTTAATCTCCCGAGACGAAGGCCTCCACTGCGATTTCGCCTGCCTACTCTACACTCTACTAAACAACAAACTAACAGAAGAGCGCGTAAAGTCCATAGTATCAGACGCAGTTGACATCGAACGTGAGTTTGTTTGTGATGCGCTACCATGTGCACTAGTTGGCATGAATGGTGAACTCATGAGTGAATATATCCAGTTTGTTGCGGATAGGTTGTTGGTGTCACTAGGATTTAGCAAAATGTACAATGTTTCGAACCCGTTTGATTGGATGGAACTGATTTCGTTACAAGGGAAGACTAATTTCTTCGAGAAGCGAGTAGGGGAGTATCAAAAGGCTTCGATTATGTCGAATTTGAATGGAAATGGTGCTGCTGATCATGTGTTCAAGATGGATGAAGATTTTTGA | 996 | 43.78 | MPSLIPEEPLLTPTEDRFCMFPIHYPQIWEMYKKAQASFWTAEEVDLSSDIRHWESLTDGERHFITHVLAFFASSDGIVLENLATRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYVKDGKEKDRLFRAVETIPCVEKKAKWAMKWIQGSESFAERIIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLNNKLTEERVKSIVSDAVDIEREFVCDALPCALVGMNGELMSEYIQFVADRLLVSLGFSKMYNVSNPFDWMELISLQGKTNFFEKRVGEYQKASIMSNLNGNGAADHVFKMDEDF | 331 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glco7g02099 | 331 | PANTHER | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN | 8 | 331 | IPR000358 | GO:0009263(InterPro) | |
| Glco7g02099 | 331 | Pfam | Ribonucleotide reductase, small chain | 17 | 283 | IPR000358 | GO:0009263(InterPro) | |
| Glco7g02099 | 331 | CDD | RNRR2 | 18 | 292 | IPR033909 | GO:0009263(InterPro) | |
| Glco7g02099 | 331 | Gene3D | Ribonucleotide Reductase, subunit A | 4 | 308 | IPR012348 | GO:0016491(InterPro) | |
| Glco7g02099 | 331 | ProSitePatterns | Ribonucleotide reductase small subunit signature. | 106 | 122 | IPR030475 | - | |
| Glco7g02099 | 331 | SUPERFAMILY | Ferritin-like | 6 | 308 | IPR009078 | - | |
| Glco7g02099 | 331 | PIRSF | NrdB | 6 | 317 | IPR000358 | GO:0009263(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Glco7g02099 | K10808 | ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] | ||||
| Glco7g02099 | K00526 | ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 100375 | Glco7g02099 | Glco8g02399 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Glco | Glco-Chr7:344470306 | Glco8g02399 | Glco-Chr8:129590105 | dispersed | |
| Glco | Glco-Chr7:344163664 | Glco7g02099 | Glco-Chr7:344470306 | tandem |