AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glco7g02102 | ATGGGTATTAAGGCAAAAGAGTTGTTGATAACATTTATAAACAACAGATGGCTAGTGTTCATAGCAGCAATGTGGATACAATCATGTGCAGGAATAGGGTACTTGTTTGGAAGTATATCACCTGTTATAAAGTCATCATTAAACTATAACCAGAAACAAGTAGCAAGGTTAGGTGTTGCTAAGGATCTTGGTGACAGTGTTGGTTTCTTGGCTGGGAGTATGTCTGAGATTCTGCCTTTGTGGGCCTTACTTTTGGTTGGTGCTATTCAGAATTTTGTTGGCTATGGCTGGGTTTGGCTTGTTGTTACTGGTAAAGCTCCTGTTTTGCCTTTGTGGCTGATGTGCCTTCTCATATTCATTGGAACCAATGGCGAAACCTACTTCAACACAGCAGCATTAGTTTCATGTGTTCAAAACTTCCCCAAAAGCCGTGGGCCAGTGGTCGGAATATTAAAAGGATTCGCAGGGCTCAGTGGTGCAATATTAACCCAAGTATACGCATTAATAAACTCACCCGATAAAGCCTCACTTATATTCATGGTTGCTGTCGGGCCTACAATGGTAGTAATTGCCCTCATGTTCATTGTTCGACCAGTTGGTGGTCACAGACAACTTAGATTATCAGATGCGTCGAATTTCTCAATAATATACTGCATTTGTCTCATTTTAGCCGCGTACTTAATGGGAGTTATGCTTGTTGAAGATTTAATTGATTTAAACGAAACAATAGTCCAAATTTTTACCGCCATATTATTTGTGCTTTTAGTGGTTCCAATTGGAATTCCTATATACTTGACTTTTTCTTCTGACCGGAGAACCCCTGAACAAGAAGCTCTTTTATCTGAACCACAACATAAAGAACCCGAAACATCACATGACCCGAATGAGATTATATTTAGTGAAGTAGAAGAGGAGAAGCCTCATGATGTAGACTTGCTTCCGGCTTCAGAAAGGCAAAAGAGAATAGCTCAGTTACAATCTAAGTTGGCTCAAGCAGCTGCAGAAGGGGCTGTGAGGATTAAGAGGACAAGGGGCCCACATAGAGGCGAAGATTTTGACCTTACACAAGCTTTGATTAAAGCTGATTTTTGGCTACTTTTTTTCACCCTTTTGTTAGGGTCAGGTTCGGGTTTGACTGTGATTGACAATTTGGGGCAGATGAGTGAGTCCTTAGGGTACGATAATACTCATATCTTTGTTTCAATGATCAGCATTTGGAACTTCTTGGGTCGTGTTGGTGGTGGCTATGTCTCAGAGATCGTCGTCAGGGATTACGCATACCCAAGGCCAGTAGCTCTGGCTGTTGCACAGGCCATAATGGCAATCGGGCATTTATTCTTTGCAATGGGTTGGCCTGGTGCAATGTACATCGGTACCCTTTTGATCGGGCTAGGCTACGGGTTCCACTGGGCTATCATACCAGCTACTGCCTCCGAATTATTTGGACTCAAAAAGTTTGGAGCCTTATATAATTTCCTCACCCTGGCAAACCCTGCCGGTTCTCTAGTCTTTAATGGTCTCATTGCTAGTTACATATACGACTCTGAAGCAGAAAAACAAGCTCAACTACACACAAGTTCAGCTTCTTATTTGACAAAGCTTTTTGACACGGACGATGCCCTTAAGTGCTCGGGTTCCATATGCTTCTTTCTCACTTACATGATAATGTCAGGACTCTGCATCATTGCATGTATCCTGAGTTTGATACTCGTACGCCGAACTAAGAGTGTCTACCAGCACCTTTACGGTAAAAGAACATAA | 1761 | 42.19 | MGIKAKELLITFINNRWLVFIAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKQVARLGVAKDLGDSVGFLAGSMSEILPLWALLLVGAIQNFVGYGWVWLVVTGKAPVLPLWLMCLLIFIGTNGETYFNTAALVSCVQNFPKSRGPVVGILKGFAGLSGAILTQVYALINSPDKASLIFMVAVGPTMVVIALMFIVRPVGGHRQLRLSDASNFSIIYCICLILAAYLMGVMLVEDLIDLNETIVQIFTAILFVLLVVPIGIPIYLTFSSDRRTPEQEALLSEPQHKEPETSHDPNEIIFSEVEEEKPHDVDLLPASERQKRIAQLQSKLAQAAAEGAVRIKRTRGPHRGEDFDLTQALIKADFWLLFFTLLLGSGSGLTVIDNLGQMSESLGYDNTHIFVSMISIWNFLGRVGGGYVSEIVVRDYAYPRPVALAVAQAIMAIGHLFFAMGWPGAMYIGTLLIGLGYGFHWAIIPATASELFGLKKFGALYNFLTLANPAGSLVFNGLIASYIYDSEAEKQAQLHTSSASYLTKLFDTDDALKCSGSICFFLTYMIMSGLCIIACILSLILVRRTKSVYQHLYGKRT | 586 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glco7g02102 | 586 | Pfam | Nodulin-like | 16 | 263 | IPR010658 | - | |
| Glco7g02102 | 586 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 29 | - | - | |
| Glco7g02102 | 586 | MobiDBLite | consensus disorder prediction | 276 | 295 | - | - | |
| Glco7g02102 | 586 | CDD | MFS-Mch1p-like | 16 | 564 | - | - | |
| Glco7g02102 | 586 | SUPERFAMILY | MFS general substrate transporter | 213 | 576 | IPR036259 | - | |
| Glco7g02102 | 586 | Gene3D | MFS general substrate transporter like domains | 303 | 535 | IPR036259 | - | |
| Glco7g02102 | 586 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 15 | 579 | - | GO:0016020(PANTHER) | |
| Glco7g02102 | 586 | FunFam | Nodulin family protein | 354 | 580 | - | - | |
| Glco7g02102 | 586 | Coils | Coil | 315 | 335 | - | - | |
| Glco7g02102 | 586 | SUPERFAMILY | MFS general substrate transporter | 7 | 203 | IPR036259 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Glco7g02102 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Glco | Glco-Chr2:647976892 | Glco7g02102 | Glco-Chr7:344505211 | dispersed | |
| Glco | Glco-Chr6:71456182 | Glco7g02102 | Glco-Chr7:344505211 | dispersed | |
| Glco | Glco-Chr6:71480409 | Glco7g02102 | Glco-Chr7:344505211 | dispersed | |
| Glco | Glco-Chr7:344505211 | Glco9g01468 | Glco-Chr9:82585660 | dispersed | |
| Glco | Glco-Chr7:344505211 | Glco4g06309 | Glco-Chr4:584110331 | transposed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Glco1g00718 | . | 9 | 333 | Nodulin-like gene family | AT3G30340 | 51.057 | 4.81e-119 | 347.0 | |
| Glco1g01187 | . | 16 | 347 | Nodulin-like gene family | AT5G45370 | 64.326 | 1.73e-164 | 462.0 | |
| Glco1g05038 | ACH | 6 | 494 | Nodulin-like gene family | AT2G30300 | 48.851 | 9.74e-152 | 441.0 | |
| Glco1g06367 | . | 10 | 359 | Nodulin-like gene family | AT1G09380 | 49.143 | 4.36e-117 | 342.0 | |
| Glco1g06368 | . | 10 | 327 | Nodulin-like gene family | AT1G09380 | 52.201 | 1.24e-116 | 341.0 | |
| Glco1g06369 | . | 53 | 327 | Nodulin-like gene family | AT1G09380 | 52.727 | 1.00e-102 | 303.0 | |
| Glco1g06371 | . | 174 | 326 | Nodulin-like gene family | AT1G09380 | 49.02 | 2.48e-50 | 164.0 | |
| Glco1g06376 | . | 4 | 326 | Nodulin-like gene family | AT1G09380 | 54.799 | 2.63e-128 | 370.0 | |
| Glco2g00699 | . | 3 | 351 | Nodulin-like gene family | AT1G21890 | 60.172 | 5.04e-153 | 435.0 | |
| Glco2g01889 | . | 1 | 740 | Nodulin-like gene family | AT4G19180 | 59.144 | 0.0 | 866.0 | |
| Glco2g05084 | . | 2 | 198 | Nodulin-like gene family | AT3G43660 | 69.543 | 6.67e-96 | 275.0 | |
| Glco2g05308 | . | 15 | 389 | Nodulin-like gene family | AT1G75500 | 73.936 | 0.0 | 568.0 | |
| Glco2g05918 | . | 124 | 575 | Nodulin-like gene family | AT4G19180 | 36.0 | 3.17e-94 | 301.0 | |
| Glco2g06192 | . | 7 | 578 | Nodulin-like gene family | AT5G14120 | 60.733 | 0.0 | 700.0 | |
| Glco2g06537 | ACH | 248 | 407 | Nodulin-like gene family | AT1G80530 | 48.171 | 2.33e-35 | 126.0 | |
| Glco2g06538 | ACH | 5 | 554 | Nodulin-like gene family | AT1G80530 | 58.123 | 0.0 | 656.0 | |
| Glco2g06539 | . | 7 | 561 | Nodulin-like gene family | AT1G80530 | 60.036 | 0.0 | 679.0 | |
| Glco2g06556 | . | 5 | 196 | Nodulin-like gene family | AT1G80530 | 48.78 | 9.82e-65 | 207.0 | |
| Glco2g06567 | . | 108 | 293 | Nodulin-like gene family | AT1G80530 | 47.594 | 7.55e-48 | 162.0 | |
| Glco2g06854 | . | 1 | 363 | Nodulin-like gene family | AT4G30420 | 49.057 | 5.82e-124 | 360.0 | |
| Glco3g02031 | ACH | 2 | 198 | Nodulin-like gene family | AT3G43660 | 67.647 | 3.35e-95 | 274.0 | |
| Glco3g02032 | ACH | 1 | 198 | Nodulin-like gene family | AT3G43660 | 63.551 | 2.28e-93 | 270.0 | |
| Glco3g02033 | ACH | 2 | 198 | Nodulin-like gene family | AT3G43660 | 66.01 | 7.91e-92 | 266.0 | |
| Glco3g02034 | ACH | 1 | 198 | Nodulin-like gene family | AT3G43660 | 64.186 | 6.76e-95 | 273.0 | |
| Glco3g02035 | ACH | 1 | 198 | Nodulin-like gene family | AT3G43660 | 64.352 | 3.16e-94 | 272.0 | |
| Glco3g04038 | . | 25 | 364 | Nodulin-like gene family | AT5G40230 | 47.278 | 1.55e-98 | 294.0 | |
| Glco3g06254 | . | 4 | 564 | Nodulin-like gene family | AT4G19450 | 48.601 | 8.35e-168 | 486.0 | |
| Glco4g00158 | . | 4 | 350 | Nodulin-like gene family | AT1G09380 | 51.437 | 4.34e-125 | 362.0 | |
| Glco4g06309 | . | 6 | 579 | Nodulin-like gene family | AT5G14120 | 61.111 | 0.0 | 711.0 | |
| Glco4g07322 | . | 203 | 337 | Nodulin-like gene family | AT1G68170 | 45.185 | 1.34e-37 | 132.0 | |
| Glco4g07323 | . | 1 | 189 | Nodulin-like gene family | AT1G25270 | 41.27 | 2.11e-46 | 154.0 | |
| Glco4g07324 | . | 203 | 337 | Nodulin-like gene family | AT1G68170 | 43.704 | 1.58e-35 | 125.0 | |
| Glco4g07325 | . | 1 | 189 | Nodulin-like gene family | AT1G25270 | 40.741 | 9.32e-46 | 152.0 | |
| Glco5g00755 | . | 4 | 564 | Nodulin-like gene family | AT4G19450 | 48.517 | 4.67e-164 | 476.0 | |
| Glco5g04467 | . | 1 | 566 | Nodulin-like gene family | AT4G19450 | 60.457 | 0.0 | 636.0 | |
| Glco5g05707 | . | 9 | 595 | Nodulin-like gene family | AT2G39210 | 62.649 | 0.0 | 754.0 | |
| Glco5g05993 | . | 5 | 366 | Nodulin-like gene family | AT2G37460 | 66.484 | 8.28e-176 | 493.0 | |
| Glco6g00556 | . | 4 | 349 | Nodulin-like gene family | AT5G64700 | 44.798 | 1.73e-89 | 271.0 | |
| Glco6g01214 | . | 1 | 336 | Nodulin-like gene family | AT1G25270 | 40.774 | 6.27e-91 | 276.0 | |
| Glco6g01290 | ACH | 343 | 427 | Nodulin-like gene family | AT1G80530 | 61.176 | 3.88e-28 | 105.0 | |
| Glco6g01291 | ACH | 7 | 561 | Nodulin-like gene family | AT1G80530 | 59.002 | 0.0 | 667.0 | |
| Glco6g02083 | . | 15 | 388 | Nodulin-like gene family | AT1G75500 | 72.995 | 0.0 | 561.0 | |
| Glco6g02202 | . | 8 | 348 | Nodulin-like gene family | AT5G64700 | 39.474 | 7.84e-78 | 241.0 | |
| Glco6g05287 | . | 16 | 349 | Nodulin-like gene family | AT5G45370 | 62.011 | 3.96e-161 | 455.0 | |
| Glco6g05997 | . | 122 | 559 | Nodulin-like gene family | AT4G19180 | 27.594 | 4.02e-45 | 167.0 | |
| Glco7g00824 | . | 14 | 191 | Nodulin-like gene family | AT3G43660 | 43.182 | 3.06e-51 | 164.0 | |
| Glco7g01857 | . | 8 | 364 | Nodulin-like gene family | AT3G28050 | 57.618 | 1.64e-135 | 389.0 | |
| Glco7g01859 | . | 3 | 365 | Nodulin-like gene family | AT3G28050 | 64.674 | 3.15e-159 | 449.0 | |
| Glco7g01860 | . | 3 | 365 | Nodulin-like gene family | AT3G28050 | 58.537 | 1.86e-138 | 396.0 | |
| Glco7g01862 | . | 12 | 355 | Nodulin-like gene family | AT5G40240 | 41.88 | 3.43e-87 | 265.0 | |
| Glco7g01867 | . | 11 | 346 | Nodulin-like gene family | AT5G40240 | 42.604 | 1.01e-83 | 257.0 | |
| Glco7g01869 | . | 11 | 355 | Nodulin-like gene family | AT5G40240 | 41.854 | 5.76e-92 | 278.0 | |
| Glco7g01870 | . | 16 | 353 | Nodulin-like gene family | AT5G40240 | 43.44 | 2.39e-89 | 271.0 | |
| Glco7g01875 | . | 1 | 342 | Nodulin-like gene family | AT5G40240 | 42.899 | 2.43e-88 | 269.0 | |
| Glco7g01877 | . | 11 | 342 | Nodulin-like gene family | AT5G40240 | 42.985 | 5.83e-87 | 265.0 | |
| Glco7g01878 | . | 9 | 365 | Nodulin-like gene family | AT3G28050 | 39.56 | 3.70e-82 | 253.0 | |
| Glco7g02102 | . | 1 | 576 | Nodulin-like gene family | AT5G14120 | 72.402 | 0.0 | 861.0 | |
| Glco7g02833 | . | 22 | 366 | Nodulin-like gene family | AT5G40230 | 36.648 | 9.64e-73 | 228.0 | |
| Glco7g02835 | . | 22 | 366 | Nodulin-like gene family | AT5G40230 | 41.761 | 3.62e-85 | 260.0 | |
| Glco7g03323 | . | 17 | 364 | Nodulin-like gene family | AT5G40230 | 31.414 | 2.82e-58 | 192.0 | |
| Glco7g03324 | . | 8 | 366 | Nodulin-like gene family | AT3G28050 | 37.326 | 6.71e-71 | 223.0 | |
| Glco7g03327 | . | 1 | 346 | Nodulin-like gene family | AT1G70260 | 45.402 | 2.69e-107 | 317.0 | |
| Glco7g03328 | . | 9 | 346 | Nodulin-like gene family | AT1G70260 | 44.838 | 5.58e-105 | 311.0 | |
| Glco7g03386 | . | 11 | 355 | Nodulin-like gene family | AT5G40240 | 40.449 | 4.99e-82 | 253.0 | |
| Glco7g03418 | . | 6 | 357 | Nodulin-like gene family | AT3G18200 | 67.324 | 3.27e-175 | 489.0 | |
| Glco7g03701 | . | 16 | 562 | Nodulin-like gene family | AT4G34950 | 68.885 | 0.0 | 774.0 | |
| Glco7g05048 | . | 1 | 740 | Nodulin-like gene family | AT4G19180 | 56.026 | 0.0 | 781.0 | |
| Glco7g05335 | . | 8 | 362 | Nodulin-like gene family | AT2G39510 | 54.19 | 1.66e-134 | 387.0 | |
| Glco7g05336 | . | 7 | 372 | Nodulin-like gene family | AT2G39510 | 51.226 | 2.12e-138 | 397.0 | |
| Glco7g05337 | . | 1 | 374 | Nodulin-like gene family | AT2G39510 | 55.851 | 2.71e-147 | 420.0 | |
| Glco7g05523 | . | 91 | 329 | Nodulin-like gene family | AT3G30340 | 35.565 | 8.58e-50 | 166.0 | |
| Glco7g05944 | . | 116 | 354 | Nodulin-like gene family | AT1G68170 | 39.6 | 3.92e-47 | 159.0 | |
| Glco7g05945 | . | 121 | 349 | Nodulin-like gene family | AT1G68170 | 39.056 | 5.96e-48 | 160.0 | |
| Glco7g05947 | . | 121 | 347 | Nodulin-like gene family | AT1G68170 | 36.402 | 5.10e-45 | 152.0 | |
| Glco7g05949 | . | 1 | 341 | Nodulin-like gene family | AT1G25270 | 41.983 | 7.91e-96 | 289.0 | |
| Glco7g05972 | ACH | 5 | 198 | Nodulin-like gene family | AT3G43660 | 61.165 | 1.09e-87 | 256.0 | |
| Glco7g05974 | ACH | 5 | 198 | Nodulin-like gene family | AT3G43660 | 61.165 | 1.12e-87 | 256.0 | |
| Glco7g06497 | . | 13 | 363 | Nodulin-like gene family | AT4G08290 | 36.261 | 5.41e-77 | 240.0 | |
| Glco8g00335 | . | 7 | 363 | Nodulin-like gene family | AT2G39510 | 51.117 | 1.35e-133 | 385.0 | |
| Glco8g02532 | . | 5 | 559 | Nodulin-like gene family | AT2G28120 | 71.583 | 0.0 | 820.0 | |
| Glco8g02562 | . | 9 | 559 | Nodulin-like gene family | AT2G28120 | 71.712 | 0.0 | 810.0 | |
| Glco8g06369 | . | 3 | 343 | Nodulin-like gene family | AT5G07050 | 71.345 | 8.82e-173 | 486.0 | |
| Glco8g06372 | . | 250 | 387 | Nodulin-like gene family | AT5G07050 | 58.553 | 1.31e-51 | 167.0 | |
| Glco8g06374 | . | 3 | 175 | Nodulin-like gene family | AT5G07050 | 74.138 | 5.04e-91 | 270.0 | |
| Glco8g06378 | . | 3 | 387 | Nodulin-like gene family | AT5G07050 | 64.75 | 3.29e-174 | 490.0 | |
| Glco8g06411 | . | 3 | 387 | Nodulin-like gene family | AT5G07050 | 64.75 | 1.28e-174 | 491.0 | |
| Glco9g01468 | . | 12 | 590 | Nodulin-like gene family | AT2G39210 | 65.976 | 0.0 | 772.0 | |
| Glco9g02997 | ACH | 4 | 198 | Nodulin-like gene family | AT3G43660 | 69.036 | 1.93e-96 | 277.0 | |
| Glco9g02999 | ACH | 3 | 198 | Nodulin-like gene family | AT3G43660 | 70.408 | 3.04e-97 | 279.0 | |
| Glco9g03000 | ACH | 2 | 198 | Nodulin-like gene family | AT3G43660 | 68.0 | 1.53e-92 | 267.0 | |
| Glco9g03008 | ACH | 2 | 198 | Nodulin-like gene family | AT3G43660 | 68.528 | 1.38e-93 | 270.0 | |
| Glco9g03009 | ACH | 2 | 198 | Nodulin-like gene family | AT3G43660 | 68.528 | 1.38e-93 | 270.0 | |
| Glco9g03012 | ACH | 13 | 198 | Nodulin-like gene family | AT3G43660 | 67.553 | 3.71e-90 | 261.0 | |
| Glco9g03013 | ACH | 2 | 198 | Nodulin-like gene family | AT3G43660 | 70.051 | 1.37e-97 | 280.0 | |
| Glco9g05173 | . | 1 | 364 | Nodulin-like gene family | AT4G30420 | 52.688 | 8.96e-134 | 385.0 | |
| Glco9g05174 | . | 1 | 364 | Nodulin-like gene family | AT4G30420 | 50.538 | 1.94e-128 | 372.0 | |
| Glco9g05178 | . | 1 | 360 | Nodulin-like gene family | AT4G30420 | 48.352 | 2.14e-122 | 356.0 | |
| Glco10000054.1g00046 | . | 1 | 566 | Nodulin-like gene family | AT2G39210 | 69.894 | 0.0 | 817.0 | |
| Glco10000054.1g00047 | . | 1 | 566 | Nodulin-like gene family | AT2G39210 | 68.717 | 0.0 | 804.0 | |
| Glco10000109.1g00012 | . | 6 | 356 | Nodulin-like gene family | AT5G40240 | 43.305 | 1.10e-94 | 285.0 | |
| Glco10000119.1g00019 | . | 11 | 556 | Nodulin-like gene family | AT2G28120 | 64.964 | 0.0 | 745.0 | |
| Glco10000229.1g00024 | . | 8 | 361 | Nodulin-like gene family | AT4G08290 | 36.667 | 3.30e-76 | 238.0 | |
| Glco10000299.1g00006 | . | 5 | 529 | Nodulin-like gene family | AT1G74780 | 57.905 | 0.0 | 577.0 | |
| Glco10000299.1g00007 | . | 5 | 530 | Nodulin-like gene family | AT1G74780 | 57.116 | 0.0 | 565.0 | |
| Glco10000299.1g00009 | . | 5 | 530 | Nodulin-like gene family | AT1G74780 | 56.654 | 0.0 | 575.0 | |
| Glco10000299.1g00011 | . | 5 | 530 | Nodulin-like gene family | AT1G74780 | 57.685 | 0.0 | 577.0 | |
| Glco10000299.1g00012 | . | 4 | 522 | Nodulin-like gene family | AT2G34350 | 53.422 | 0.0 | 524.0 | |
| Glco10000958.1g00019 | . | 5 | 193 | Nodulin-like gene family | AT3G43660 | 25.105 | 2.23e-09 | 53.9 | |
| Glco10001674.1g00006 | . | 9 | 559 | Nodulin-like gene family | AT2G28120 | 71.712 | 0.0 | 810.0 |