AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco7g02114 ATGGGATCAGAAATAACAGAACCGTTAGTAGTAACAGAACCCAAAAAGCAATCATCAGATGAATCCATACCCGAATGGAAGGATCAGATCACGTTAAGAGGACTAGTAGTGAGCGCTTTGTTAGGGACTTTATTCTGCATCATAACTCACAAGCTGAATTTAACAGTTGGGATTATCCCTTCGTTAAATGTAGCGGCTGGTTTGTTGGGTTTCTTTTTTGTAAAGTCGTGGACTAGTCTTTTGGAAAAGTTTGGAGTTGTTGTCAAGCCGTTTACGAGGCAGGAGAATACGGTTATTCAGACTTGTGTTGTTGCTTGTTATGGCCTTGCTTTTAGCGGTGGATTTGGGTCATATTTGCTTTCAATGGATGAGAGAACTTACAATTTAATTGGTGCCGACTACCCTGGTAATCGGGCTGAAGATGTGAAGGACCCAGGGTTATTGTGGATGATGGGTTTCATTTTTGTTGTTAGTTTTCTTGGCCTCTTCAGTCTTGTTCCACTTCGCAAGGTGATGGTAATGGATTATAAGCTTACATACCCTAGTGGAACTGCCACTGCAATGTTGATAAATAGTTTCCACACTACCACAGGTGCAGAGCTTGCAAGTAAACAAGTAAGCTCTCTCGGAAAGTATCTGAGCATAAGCTTTGCCTGGAGTTGCTTTAAGTGGTTCTTCAGTGGTGTTGGTGATGCATGTGGTTTTGATAATTTCCCTAGTTTTGGCTTGATGCTTTACAAAAATACATTTTACTTCGACTTCAGTCCAACTTATGTGGGATGTGGTCTTATTTGCCCTCATATAGTCAACTGTTCAGTTCTTTTTGGAGCTATTGTATCTTGGGGTTTTCTTTGGCCTTTGATTACAACATACGCGGGAGATTGGTATCCAGCTGATCTGGGAAGCAATGACTTCAAAGGTCTCTATGGCTACAAGGTTTTTATATCCATTGCCCTTATTCTTGGAGATGGTCTTTACAATCTGGTTAAGATAATATTTATCTCCATGAAGGCTTTGTTGAATAGCCGCACCAAGCAACAAAATCTCCCCGTGACACACGAGATTTTAGATGCCGAGACAGCTAAAGCACAACTTGAAGAAAAAAGACGAGACACTGTCTTCTTAAAAGACAGTATACCAACATGGGTTGCAGCATCAGGATACATAGCTTTAGTAGCAATATCAATGGCTACAATGCCACTCATTTTTCCACCCTTAAAATGGTACCTTGTGCTATGCGCATACATCATCGCGCCTGCATTAGCTTTCTGCAACTCATATGGAACCGGTCTTACCGACTGGAGTCTAGCTTCAACATATGGCAAAATCGGTCTATTCATCATAGCATCATTAGTTGGATCAGATGGTGGAGTCATAGCTGGTTTAGCCGGATGTGGGGTCATGATGTCAATTGTTGCAACTGCTGCTGATTTAATGCAAGATTTCAAAACCGGTTACCTTACATTATCATCAGCAAAATCCATGTTTGTAAGTCAGTTAGTCGGAACAGCTATGGGATGCATCATTGCACCGCTCACATTTTGGATGTTTTGGAGCGCATTCGAAATCGGGACCCCCGATAGTCCTTATAAGGCACCATACGCCGTCATATACCGTGAAATGGCTATCCTTGGTGTCGAGGGGTTTTCTGAGCTCCCCAAACATTGTTTGGCTTTATGCTGTGGATTTTTTGTGGCAGCATTAATCTTAAATCTTTTACGAGATTTTACTCCCAAAAAAGTGTCTCAATTCATACCTATTCCAATGGCAATGGCAGTTCCATTCTATATTGGGGCGTATTTCGCAATCGACATGTTTATTGGAACAGTGATACTCTTTGTGTGGGAGCGAGTGAACAAGAAAGACGCGGAAGATTATGCAGGAGCAGTTGCTTCAGGCTTAATATGTGGTGACGGGATATGGACCATCCCATCAGCTATACTCTCGATTCTAAGGGTTGATCCACCAATCTGCATGTACTTCGGACCATCTGTGAGTTCGTGA 2004 42.07 MGSEITEPLVVTEPKKQSSDESIPEWKDQITLRGLVVSALLGTLFCIITHKLNLTVGIIPSLNVAAGLLGFFFVKSWTSLLEKFGVVVKPFTRQENTVIQTCVVACYGLAFSGGFGSYLLSMDERTYNLIGADYPGNRAEDVKDPGLLWMMGFIFVVSFLGLFSLVPLRKVMVMDYKLTYPSGTATAMLINSFHTTTGAELASKQVSSLGKYLSISFAWSCFKWFFSGVGDACGFDNFPSFGLMLYKNTFYFDFSPTYVGCGLICPHIVNCSVLFGAIVSWGFLWPLITTYAGDWYPADLGSNDFKGLYGYKVFISIALILGDGLYNLVKIIFISMKALLNSRTKQQNLPVTHEILDAETAKAQLEEKRRDTVFLKDSIPTWVAASGYIALVAISMATMPLIFPPLKWYLVLCAYIIAPALAFCNSYGTGLTDWSLASTYGKIGLFIIASLVGSDGGVIAGLAGCGVMMSIVATAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMGCIIAPLTFWMFWSAFEIGTPDSPYKAPYAVIYREMAILGVEGFSELPKHCLALCCGFFVAALILNLLRDFTPKKVSQFIPIPMAMAVPFYIGAYFAIDMFIGTVILFVWERVNKKDAEDYAGAVASGLICGDGIWTIPSAILSILRVDPPICMYFGPSVSS 667
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco7g02114 667 Pfam OPT oligopeptide transporter protein 29 648 IPR004813 GO:0035673(InterPro)
Glco7g02114 667 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 15 663 IPR045035 GO:0016020(PANTHER)|GO:0035673(InterPro)
Glco7g02114 667 MobiDBLite consensus disorder prediction 1 22 - -
Glco7g02114 667 NCBIfam OPT family oligopeptide transporter 28 645 IPR004813 GO:0035673(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco7g02114 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr4:234795274 Glco7g02114 Glco-Chr7:345918278 dispersed
Glco Glco-Chr7:345918278 Glco7g03543 Glco-Chr7:426800483 dispersed
Glco Glco-Chr7:345918278 Glco7g04476 Glco-Chr7:473025519 transposed