AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glco7g02123 | ATGACAGATGATCAAGATCAACCACCCCCTGCAGATAATACCACCACCAATAACGAAACCACGAAACTCGAAGCCAACGATCCCGACCCCGAAAACGAACCATCATCCCTCGCGTCACAAGACACGAAACTCTACGACACAATCGACGAATTCATTTCCACGTTATCCTCCAATGACCAACAACCAGACTCTTCATCACCTCCTGAAATCATCGACTCTGTCAAAAACTACGCTGATCTTTTCGACGTAAAGATCGTCGAATACGAAACCGGCTCCAAAAAATGGATCCATCTTGAACAAAACGAATCTGATTCGTTTATTGAATCTGTTGACAGGACTGCCAAGCTTTTGAAATCGTTATCCACGTTCCATGCTGACGAGAATTACGCTGTTTTGATTAACAGGGTTAGTGGTATTCAGCAACGCGCAATGTCGTTTATGGAGGTGGAGTTTAAGTCCATTCTGGATGAGTTTTCGACGTCGTTTGATCGTGATCAGAAGAGTAAACTGGACGAAGCGAAAAGTAGTAAGGAATTATCGGCGTCTTTGAGTAATGTTAAGGAGGTGGCGGATGATGAGAAGAAGGAGACAACGGTTGATGAGACGGAGGTCGAAAAGGAGAAAGAAAAAGATGATTTTTTAGGTTATTCGGATGAGATGATATTGAATTTGAAGAAATTGGCGAAAGGTTTGATAGAAGGTGGACATGAGACGGAGTGTAGCGAATTGTATTTTTTCGTCAGAAGGAATGCAATGGAACAGAATTTGAAGGTTGTTAGTTTTGAAAAGTTTTCGATTGATGAGATGCAGAAGATGCAATGGGATCCTGTTGAGAAAGAGGTGACGTCGTGGATGAAGATGTTTAAAAACTTTTGTGGTTCGCTATTGCCTAGCGAGCGGAAACTTGTTGATGCTGTGTTTTGTGATAGGGTCACAATTTCGGATCATTTATTTGGGAATTTGACGCGAATTGTGTTGTTTTATTTTCTAAGTTTTGCAGAAGCTGTTATGATGACGAAACGTTCTGCTGAGAAACTGTTTAAGTTTCTAGATATTTATGAAACTTTACGAGATAGTATTCCCGAGGTTGAGAAACTGTTGTCTGAGGAGTGGCTACCACAGCTCAAATCCTCGGTTTCGTTAATAAGTAATATGTTAGGAGAGGCTATTTACAATATTTTTATAGAGCTTGAGAATTCGATTAGGGCTGATACAGCTAAGACACCTGTTCCTGGTGGAGCGGTACATCCTTTAACTCGTTACACTATGAATTATTTGAAATACGCGTGTGAGTATAGTAACACGTTGGAGCAAGTTTTTAGGCAACATAAAAAGATAGAGCGATCTGATTCAGCTACAGGGTCTGAAAGCGATCAAAATCCTCAAGAGCAAGCACAAAACCAGGGGAGTCAAACAGGACATGGGTCGCCGTTTCAGTCACAATTAGCCAAAATAATGGATCTGCTGGACACGAACCTGGAAGCAAAATCGAGACTCTACAGAGATCAATCATTGAGTTTGATATTTATGATGAATAACGGGCGTTACATATTGCAGAAGACAAAGGGGACAGGTGAAATGAGGAGCTTGATGGGTGACCCATGGGTGAGAAAAAGGTCCTCGGATTTAAGGAGTTACCACACAAACTACAAGCGCGAAACATGGACAAAGTTGTTGCAATGTTTGAGTCACGAAGGATTGAGTGCAAACGGGAAGGTCATGAAACCTGTGCTAAAAGAAAGGTTCAAGAGTTTTAATGCTATGTTTGATGAAATACATAGAACGCAAACCACATGGGTTGTGAGCGATGAGCAGCTTCAGTCAGAGCTCAGGGTGTCGATATCAGCTATAGTGATCCCAGCTTATCGGTCGTTTATGGGGAGGTTCAGTCAGGTGTTTACTCCAGGAAGGCAAACAGAGAAGTATATTAAGTATCAGCCGGAAGATATAGAAACATGTATTGAAGAGCTGTTTGATGGGACGACGTCTCAGCAAAGCAAGAAGAGATGA | 2010 | 41.79 | MTDDQDQPPPADNTTTNNETTKLEANDPDPENEPSSLASQDTKLYDTIDEFISTLSSNDQQPDSSSPPEIIDSVKNYADLFDVKIVEYETGSKKWIHLEQNESDSFIESVDRTAKLLKSLSTFHADENYAVLINRVSGIQQRAMSFMEVEFKSILDEFSTSFDRDQKSKLDEAKSSKELSASLSNVKEVADDEKKETTVDETEVEKEKEKDDFLGYSDEMILNLKKLAKGLIEGGHETECSELYFFVRRNAMEQNLKVVSFEKFSIDEMQKMQWDPVEKEVTSWMKMFKNFCGSLLPSERKLVDAVFCDRVTISDHLFGNLTRIVLFYFLSFAEAVMMTKRSAEKLFKFLDIYETLRDSIPEVEKLLSEEWLPQLKSSVSLISNMLGEAIYNIFIELENSIRADTAKTPVPGGAVHPLTRYTMNYLKYACEYSNTLEQVFRQHKKIERSDSATGSESDQNPQEQAQNQGSQTGHGSPFQSQLAKIMDLLDTNLEAKSRLYRDQSLSLIFMMNNGRYILQKTKGTGEMRSLMGDPWVRKRSSDLRSYHTNYKRETWTKLLQCLSHEGLSANGKVMKPVLKERFKSFNAMFDEIHRTQTTWVVSDEQLQSELRVSISAIVIPAYRSFMGRFSQVFTPGRQTEKYIKYQPEDIETCIEELFDGTTSQQSKKR | 669 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glco7g02123 | 669 | MobiDBLite | consensus disorder prediction | 32 | 71 | - | - | |
| Glco7g02123 | 669 | Pfam | Exocyst complex component Exo70 N-terminal | 99 | 157 | - | - | |
| Glco7g02123 | 669 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 82 | 660 | IPR004140 | GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(PANTHER)|GO:0006887(InterPro) | |
| Glco7g02123 | 669 | Pfam | Exo70 exocyst complex subunit C-terminal | 282 | 656 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
| Glco7g02123 | 669 | MobiDBLite | consensus disorder prediction | 453 | 478 | - | - | |
| Glco7g02123 | 669 | SUPERFAMILY | Cullin repeat-like | 96 | 659 | IPR016159 | - | |
| Glco7g02123 | 669 | Gene3D | Exocyst complex component Exo70 | 87 | 668 | - | - | |
| Glco7g02123 | 669 | MobiDBLite | consensus disorder prediction | 1 | 71 | - | - | |
| Glco7g02123 | 669 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Glco7g02123 | 669 | MobiDBLite | consensus disorder prediction | 445 | 478 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Glco7g02123 | K07195 | exocyst complex component 7 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Glco | Glco-Chr6:500266492 | Glco7g02123 | Glco-Chr7:347049299 | dispersed | |
| Glco | Glco-Chr7:347049299 | Glco9g04426 | Glco-Chr9:522934690 | dispersed | |
| Glco | Glco-Chr7:347049299 | Glco1g01867 | Glco-Chr1:95635820 | transposed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Glco1g01867 | . | 51 | 644 | EXO70 exocyst subunit family | AT5G13150 | 40.164 | 5.31e-145 | 433.0 | |
| Glco1g05000 | . | 2 | 622 | EXO70 exocyst subunit family | AT5G58430 | 52.97 | 0.0 | 660.0 | |
| Glco1g06736 | . | 292 | 348 | EXO70 exocyst subunit family | AT5G03540 | 77.193 | 8.93e-26 | 96.3 | |
| Glco1g06737 | . | 154 | 228 | EXO70 exocyst subunit family | AT5G52340 | 60.256 | 2.42e-22 | 89.7 | |
| Glco2g03595 | ACH | 9 | 658 | EXO70 exocyst subunit family | AT3G29400 | 46.224 | 0.0 | 545.0 | |
| Glco2g06152 | . | 24 | 682 | EXO70 exocyst subunit family | AT5G50380 | 54.493 | 0.0 | 712.0 | |
| Glco2g07153 | . | 24 | 633 | EXO70 exocyst subunit family | AT1G72470 | 57.619 | 0.0 | 700.0 | |
| Glco2g07251 | . | 7 | 126 | EXO70 exocyst subunit family | AT1G51640 | 31.746 | 1.94e-12 | 62.8 | |
| Glco2g07254 | . | 15 | 663 | EXO70 exocyst subunit family | AT4G31540 | 43.091 | 5.33e-174 | 511.0 | |
| Glco4g01508 | . | 15 | 208 | EXO70 exocyst subunit family | AT3G14090 | 37.949 | 4.37e-28 | 107.0 | |
| Glco4g01888 | . | 6 | 631 | EXO70 exocyst subunit family | AT5G52340 | 70.607 | 0.0 | 933.0 | |
| Glco4g05449 | . | 12 | 636 | EXO70 exocyst subunit family | AT4G31540 | 29.647 | 9.68e-82 | 272.0 | |
| Glco4g07184 | . | 16 | 632 | EXO70 exocyst subunit family | AT1G72470 | 55.469 | 0.0 | 682.0 | |
| Glco5g00836 | . | 11 | 678 | EXO70 exocyst subunit family | AT4G31540 | 67.814 | 0.0 | 941.0 | |
| Glco6g01377 | . | 24 | 683 | EXO70 exocyst subunit family | AT5G50380 | 54.79 | 0.0 | 693.0 | |
| Glco6g03320 | . | 7 | 638 | EXO70 exocyst subunit family | AT5G03540 | 79.435 | 0.0 | 1006.0 | |
| Glco6g04488 | . | 1 | 624 | EXO70 exocyst subunit family | AT5G58430 | 60.714 | 0.0 | 754.0 | |
| Glco7g01612 | ACH | 9 | 658 | EXO70 exocyst subunit family | AT3G29400 | 47.958 | 0.0 | 573.0 | |
| Glco7g02123 | . | 80 | 687 | EXO70 exocyst subunit family | AT5G13990 | 47.717 | 0.0 | 560.0 | |
| Glco8g00260 | . | 10 | 612 | EXO70 exocyst subunit family | AT2G39380 | 40.294 | 9.10e-141 | 421.0 | |
| Glco8g00261 | . | 10 | 88 | EXO70 exocyst subunit family | AT2G39380 | 32.5 | 8.13e-06 | 40.8 | |
| Glco8g00262 | . | 10 | 612 | EXO70 exocyst subunit family | AT2G39380 | 40.523 | 5.29e-139 | 416.0 | |
| Glco8g00264 | . | 10 | 612 | EXO70 exocyst subunit family | AT2G39380 | 40.62 | 3.13e-143 | 427.0 | |
| Glco8g00265 | . | 10 | 551 | EXO70 exocyst subunit family | AT2G39380 | 39.818 | 5.58e-116 | 354.0 | |
| Glco8g00266 | . | 10 | 505 | EXO70 exocyst subunit family | AT2G39380 | 40.476 | 1.45e-107 | 331.0 | |
| Glco8g00268 | . | 2 | 264 | EXO70 exocyst subunit family | AT2G39380 | 37.918 | 5.26e-39 | 141.0 | |
| Glco8g00269 | . | 306 | 612 | EXO70 exocyst subunit family | AT2G39380 | 40.909 | 2.63e-74 | 238.0 | |
| Glco8g00271 | . | 2 | 612 | EXO70 exocyst subunit family | AT2G39380 | 39.55 | 2.74e-134 | 404.0 | |
| Glco8g00272 | . | 10 | 612 | EXO70 exocyst subunit family | AT2G39380 | 40.783 | 2.01e-141 | 422.0 | |
| Glco8g00274 | . | 10 | 612 | EXO70 exocyst subunit family | AT2G39380 | 40.686 | 3.40e-139 | 417.0 | |
| Glco8g00275 | . | 42 | 612 | EXO70 exocyst subunit family | AT2G39380 | 41.146 | 3.90e-136 | 407.0 | |
| Glco8g02987 | . | 37 | 608 | EXO70 exocyst subunit family | AT3G09520 | 53.033 | 0.0 | 584.0 | |
| Glco8g02989 | . | 46 | 604 | EXO70 exocyst subunit family | AT3G09520 | 52.22 | 0.0 | 579.0 | |
| Glco8g04910 | . | 15 | 208 | EXO70 exocyst subunit family | AT3G14090 | 36.923 | 5.07e-27 | 103.0 | |
| Glco8g07237 | . | 119 | 249 | EXO70 exocyst subunit family | AT3G29400 | 45.865 | 9.34e-25 | 97.4 | |
| Glco9g01835 | . | 9 | 599 | EXO70 exocyst subunit family | AT5G59730 | 49.34 | 0.0 | 558.0 | |
| Glco9g04426 | . | 20 | 633 | EXO70 exocyst subunit family | AT1G72470 | 63.36 | 0.0 | 763.0 | |
| Glco10000553.1g00024 | . | 1 | 632 | EXO70 exocyst subunit family | AT5G03540 | 75.591 | 0.0 | 981.0 | |
| Glco10001219.1g00007 | . | 53 | 653 | EXO70 exocyst subunit family | AT5G13150 | 44.75 | 1.70e-178 | 520.0 | |
| Glco10001219.1g00014 | . | 572 | 653 | EXO70 exocyst subunit family | AT5G13150 | 71.084 | 1.81e-38 | 132.0 |