AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glco7g02149 ATGAACCCATATCAACCACCTAAATATCCTTCTTCATCAACACCAGCCTCATCATCGTCTGATCAGGCTGGTAATTATTGGAATACCCACGCCATGGGTACTCCTATGGGCGCGCCTTCTTATAATAATGCAGCTGCGCCTAATCCTTACGTCCAATATGGCGCTCCTCAGGCTCCACCACCACCTCCTCCTAGGCCAAATAACATGGATGATGTACGTAAGAAACTTAACTCGTGGGGTAATAAAGCCGAAACTACTGCTGCGAACATTTGGACCAATTTGAAATCCGGTCAATCTGTGGCTGGATCAGCATGGGGAAAATTCAATTTGACTACAAAAGCGTTAACGGAAGGTGGGTTTGAATCCTTGTACAAGCAGAATTTCACGACTTACCCAAACGAGAAGCTCAACAAGACTTTTGCATGTTATATGTCGACATCTACTGGACCTGTTGCAGGAACCTTGTACCTTTCGAATATTCATGTGGCATTTTGTAGCGATCGGCCTTTGGCTTTTAAACAACCCAACGGCATGGAGTCTTGGATCTACTACAAGGTTATAATCCCATTGGAGAAGATAGCCACAGTAAACCCGGTTACAATACCAGGCAAAAAACAAATAGACAAGTACATCCAACTCTCTACAATCGATGGCCAAGACTTCTGGTTCATGGGCTTCGTGAATCATGATAAAGCATCAAAACATCTTCTCAATGGGGTGGCAACTTGTGTTAAAACCATTCCAGTTATTCCTTGA 756 43.78 MNPYQPPKYPSSSTPASSSSDQAGNYWNTHAMGTPMGAPSYNNAAAPNPYVQYGAPQAPPPPPPRPNNMDDVRKKLNSWGNKAETTAANIWTNLKSGQSVAGSAWGKFNLTTKALTEGGFESLYKQNFTTYPNEKLNKTFACYMSTSTGPVAGTLYLSNIHVAFCSDRPLAFKQPNGMESWIYYKVIIPLEKIATVNPVTIPGKKQIDKYIQLSTIDGQDFWFMGFVNHDKASKHLLNGVATCVKTIPVIP 251
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glco7g02149 251 Pfam GRAM domain 125 235 IPR004182 -
Glco7g02149 251 MobiDBLite consensus disorder prediction 53 67 - -
Glco7g02149 251 MobiDBLite consensus disorder prediction 1 70 - -
Glco7g02149 251 Gene3D - 120 241 IPR011993 -
Glco7g02149 251 MobiDBLite consensus disorder prediction 11 29 - -
Glco7g02149 251 PANTHER GEM-LIKE PROTEIN 2 34 238 IPR037848 -
Glco7g02149 251 SMART gram2001c 122 200 IPR004182 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Glco7g02149 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Glco Glco-Chr1:233954968 Glco7g02149 Glco-Chr7:349873266 dispersed
Glco Glco-Chr1:152578696 Glco7g02149 Glco-Chr7:349873266 wgd